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Identifier Type Title Topic Level Length
GTN: News Enhancing Scientific Training: The Galaxy Training Network's Role in the ELIXIR Training Life-Cycle
gtn
GTN:N00076 News Learn to use MINERVA Platform's COVID-19 Disease Map with Galaxy
by-covidpathwaysminervagtn infrastructurenew featureone-healthtranscriptomics
GTN:N00053 News New Galaxy training: Genome-wide alternative splicing analysis
new tutorialtranscriptomics
GTN:N00039 News New Tutorial Suite: Deconvolution with MuSiC, from public data to disease interrogation!
new tutorialsingle-celltranscriptomics
GTN:N00018 News New Tutorial: Visualization of RNA-Seq results with Volcano Plot in R
new tutorialvisualisationtranscriptomics
GTN:N00011 News New Tutorials: Whole transcriptome analysis of Arabidopsis thaliana
new tutorialtranscriptomicsplantsmirna
GTN:F00298 FAQs I have FASTQ files from metagenomics or metatranscriptomics datasets? How can I convert them into a protein FASTA file for metaproteomics searches?
 Proteomics
TBA Slides Galaxy from a developer point of view
 Development in Galaxy
TBA Slides Introduction to Muon Spectroscopy
 Materials Science
TBA Slides Introduction to Synthetic Biology
 Synthetic Biology
GTN:S00094 Slides Introduction to Transcriptomics
 Transcriptomics
GTN:S00115 Slides Introduction to metatranscriptomics
 Microbiome
TBA Slides Lorum Ipsum
testpagelanguage		 Introductory 42M
TBA Slides Una breve introducción a Galaxy
 Introduction to Galaxy Analyses
TBA Slides Introducción al análisis de datos de scRNA-seq
single-cell		 Single Cell 30m
TBA Slides Lorum Ipsum
testpagelanguage		 Introductory 42M
TBA Slides Una Breve Introducción a Galaxy
 Introduction to Galaxy Analyses
TBA Slides Una introducción al análisis de datos scRNA-seq
single-cell		 Single Cell Intermediate 30m
TBA Slides Lorum Ipsum
testpagelanguage		 Introductory 42M
TBA Slides Lorum Ipsum
testpagelanguage		 Intermediate 42M
TBA FAQs How can I use the Matrix messaging system for Galaxy Project communication?
 Galaxy FAQ
GTN:T00293 Hands-on Network analysis with Heinz
metatranscriptomicsnetwork analysis		 Transcriptomics 1h30m
GTN:T00388 Hands-on Metatranscriptomics analysis using microbiome RNA-seq data
metatranscriptomicsmicrogalaxy		 Microbiome Introductory 5H
GTN:T00389 Hands-on Metatranscriptomics analysis using microbiome RNA-seq data (short)
metatranscriptomicsmicrogalaxy		 Microbiome Introductory 3H
GTN:T00240 Hands-on Bulk RNA Deconvolution with MuSiC
transcriptomics		 Single Cell 2h
GTN:T00514 Hands-on Pseudobulk Analysis with Decoupler and EdgeR
transcriptomicspseudobulk		 Single Cell 4H
GTN:T00243 Hands-on Comparing inferred cell compositions using MuSiC deconvolution
transcriptomics		 Single Cell 1H
GTN:T00242 Hands-on Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
transcriptomicsdata management		 Single Cell 1H
GTN:T00513 Hands-on Evaluating Reference Data for Bulk RNA Deconvolution
transcriptomics		 Single Cell 2H
GTN:T00503 Hands-on Multiomics data analysis using MultiGSEA
multi-omicstranscriptomicsproteomicsmetabolomics		 Proteomics 1H
TBA Hands-on Neoantigen 5b: IEDB binding PepQuery Validated Neopeptides
label-free		 Proteomics 3H
TBA Hands-on Neoantigen 1b: Non-Reference-Database-Generation
label-free		 Proteomics 3H
TBA Hands-on Neoantigen 4: Variant Annotation
label-free		 Proteomics 3H
TBA Hands-on Neoantigen 3: PepQuery2 Verification
label-free		 Proteomics 3H
TBA Hands-on Neoantigen 1a: Fusion-Database-Generation
label-free		 Proteomics 2H
TBA Hands-on Neoantigen 2: Database merge and FragPipe discovery
label-free		 Proteomics 3H
TBA Hands-on Neoantigen 5a: Predicting HLA Binding
label-free		 Proteomics 3H
TBA Hands-on Breve introducción a Galaxy - en español
 Introduction to Galaxy Analyses Introductory 30m
TBA Hands-on Production d'indicateurs champs de bloc
 Ecology 1H
GTN:W00244 Workflow DEG Part - Ref Based RNA Seq - Transcriptomics - GTN
 Transcriptomics
GTN:W00245 Workflow QC + Mapping + Counting (single+paired) - Ref Based RNA Seq - Transcriptomics - GTN
 Transcriptomics
GTN:W00246 Workflow QC + Mapping + Counting - Ref Based RNA Seq - Transcriptomics - GTN - subworkflows
 Transcriptomics
TBA Workflow WF4_Quantitation_Workflow
 Microbiome
GTN:W00127 Workflow Metatranscriptomics analysis using microbiome RNA-seq data
 Microbiome
TBA Workflow WF5_Data_Interpretation_Worklow
 Microbiome
GTN:W00128 Workflow Metatranscriptomics analysis using microbiome RNA-seq data - Workflow 1: Preprocessing
 Microbiome
GTN:W00129 Workflow Metatranscriptomics analysis using microbiome RNA-seq data - Workflow 2: Community profile
 Microbiome
GTN:W00130 Workflow Metatranscriptomics analysis using microbiome RNA-seq data - Workflow 3: Functional Information
 Microbiome
TBA Workflow WF2_Discovery-Workflow
 Microbiome
TBA Workflow WF1_Database_Generation_Workflow
 Microbiome
TBA Workflow WF3_VERIFICATION_WORKFLOW
 Microbiome
TBA Workflow Data management in Medicinal Chemistry workflow
 FAIR Data, Workflows, and Research
TBA Workflow GTN Tutorial: Data manipulation Olympics - all steps and exercises
 Foundations of Data Science
TBA Workflow Assembly of metagenomic sequencing data
 Assembly
TBA Workflow workflow-generate-dataset-for-assembly-tutorial
 Assembly
TBA Workflow GigaScience-IEDB-PepQuery-Neoantigen
 Proteomics
TBA Workflow Gigascience_Indels_SAV_non-reference_demonstration_STS26T-Gent_Workflow
 Proteomics
TBA Workflow GigaScience_Peptide_Annotation_demonstration_STS26T_neoantigen_candidates_workflow
 Proteomics
TBA Workflow GigaScience_PepQuery2_demonstration_STS26T_neoantigen_candidates_workflow
 Proteomics
TBA Workflow Gigascience_Fusions_demonstration_STS26T-Gent_Workflow
 Proteomics
TBA Workflow GigaScience_Database_merge_FragPipe_STS26T_demonstration
 Proteomics
TBA Workflow GigaScience-RNAseq-Optitype-seq2HLA-to-IEDB-alleles
 Proteomics