GTN Metadata
Author(s) | Helena Rasche |
Reviewers |
OverviewQuestions:Objectives:
What metadata is required or possible to set in a Tutorial, Slide, Topic, or FAQ
Know where to find all of the available metadata, so you can reference it later.
Time estimation: 10 minutesSupporting Materials:
Published: Jun 2, 2022Last modification: Oct 15, 2024License: Tutorial Content is licensed under Creative Commons Attribution 4.0 International License. The GTN Framework is licensed under MITpurl PURL: https://gxy.io/GTN:T00070version Revision: 8
Training Materials
A dictionary/map
(Required)Free Textlayout
This must be set to
tutorial_hands_on
Possible Values:
tutorial_hands_on
Example(s)
layout: "tutorial_hands_on"
(Required)Free Texttitle
Title of the tutorial (it will appear on the tutorial page and the topic page)
Example(s)
title: Clustering in Machine Learning
title: Breve introducción a Galaxy - en español
title: Pangeo ecosystem 101 for everyone - Introduction to Xarray Galaxy Tools
(Required)A dictionary/mapcontributions
List of tutorial contributors. Here we break them down into several broad categories to help contributors identify how they contributed to a specific tutorial.
Example(s)
contributions: authorship: - shiltemann - bebatut editing: - hexylena - bebatut - natefoo testing: - bebatut infrastructure: - natefoo translation: - shiltemann funding: - gallantries
List of Items
These entities wrote the bulk of the training material, they may have done the analysis, built the workflow, and wrote the text themselves.
List of Items
These entities provided data for this resource
List of Items
These entities edited the text, either for spelling and grammar, flow, GTN-fit, or other similar editing categories
List of Items
These entities provided funding support for the development of this resource
List of Items
These entities managed and provided infrastructure to the GTN or for training purposes
List of Items
This person reviewed this material for accuracy and correctness
List of Items
These entities tested the tutorial to ensure it works correctly for students, or reported issues with the tutorial.
List of Items
These entities did translation and localisation work on this resource
List of Items
These entities contributed UX or Design improvements to this tutorial or the GTN as a whole
(Required)Free Texttime_estimation
An estimation of the time needed to complete the hands-on.
Example(s)
time_estimation: 10M
time_estimation: 1H30M
Required Pattern: Must match the following regular expression
/^(?:([0-9]*)[Hh])*(?:([0-9]*)[Mm])*(?:([0-9.]*)[Ss])*$/
A dictionary/map
A dictionary of abbreviations and their expansions.
Example(s)
abbreviations: SQL: Structured Query Language API: Application Programming Interface
Free Text
The expansion of the abbreviated term.
List of Items
Example(s)
answer_histories: - - label: "UseGalaxy.eu" history: https://humancellatlas.usegalaxy.eu/u/j.jakiela/h/generating-a-single-cell-matrix-using-alevin-3 - label: "Older Alevin version" history: https://humancellatlas.usegalaxy.eu/u/wendi.bacon.training/h/cs1pre-processing-with-alevin---answer-key date: 2024-01-01
A dictionary/map
(Required)Free Textlabel
(Required)Free Texthistory
Required Pattern: Must match the following regular expression
/[0-9]{4,}-[0-9]{2}-[0-9]{2}/
List of Items
List of tutorial contributors. Please use
contributions
instead as it provides more detailed accounting of tutorial history.Example(s)
contributors: - hexylena - shiltemann
Free Text
A copyright attribution string, as required by some licenses.
Example(s)
copyright: © Copyright 2021-2023 University of Technology Sydney, The University of Manchester UK and RO-Crate contributors
Boolean
true
to hide your tutorial from the topic page (optional). This is useful if you need a tutorial for a workshop, but have not finished making it up to GTN standards.List of Items
A dictionary/map
Any additional variables you want to set on the page
List of Items
list of resources that the reader of the material could follow at the end of the tutorial
Example(s)
follow_up_training: - type: internal topic_name: statistics tutorials: - age-prediction-with-ml - type: external title: The Unix Shell link: "http://swcarpentry.github.io/shell-novice/" - type: none title: "A VM with at least 2 vCPUs and 4 GB RAM, preferably running Ubuntu 18.04 - 20.04."
(Required)A dictionary/mapSequence Value (List of items)
(Required)Free Texttype
the type of link
Possible Values:
internal
external
none
Example(s)
type: "internal"
type: "external"
type: "none"
Free Text
URL of the external resource
Free Text
Title of the external resource
Free Text
[Internal Only] The name of the topic
List of Items
[Internal Only] List of required tutorials inside that topic
Decimal Number
Currently unused.
Free Text
Link to a gitter channel that is more relevant for the tutorial than the default. E.g. a single cell tutorial could use
Galaxy-Training-Network/galaxy-single-cell
to link to their specific chat room.Example(s)
gitter: Galaxy-Training-Network/galaxy-single-cell
gitter: galaxy-genome-annotation/Lobby
Free Text
This must be set to
external
to link to an external tutorialPossible Values:
external
Example(s)
hands_on: "external"
Free Text
link to the external tutorial
Example(s)
hands_on_url: https://docs.qiime2.org/jupyterbooks/cancer-microbiome-intervention-tutorial/index.html#
List of Items
Example(s)
input_histories: - input_histories: - label: "UseGalaxy.eu" history: https://humancellatlas.usegalaxy.eu/u/wendi.bacon.training/h/cs1pre-processing-with-alevin---input-1 date: "2021-09-01"
A dictionary/map
(Required)Free Textlabel
(Required)Free Texthistory
Required Pattern: Must match the following regular expression
/[0-9]{4,}-[0-9]{2}-[0-9]{2}/
List of Items
List of take-home messages. This information will appear at the end of the tutorial. These should really be a key point, something that should stick in their mind; what you want them to take home from the tutorial.
Example(s)
key_points: - Pangeo ecosystem enables big data analysis in geosciences - The MiModD suite of tools bundles most of the functionality required to perform mapping-by-sequencing analyses with Galaxy - It can drastically simplify management of large numbers of VMs
Free Text
The document language.
Possible Values:
es
en
fr
Example(s)
lang: "es"
lang: "en"
lang: "fr"
Free Text
Here give a feeling of what level the material is at.
Possible Values:
Introductory
Intermediate
Advanced
Example(s)
level: "Introductory"
level: "Intermediate"
level: "Advanced"
Free Text
An SPDX identifier for the alternative license that is used for that particular material. This is only relevant for materials which have been imported from an external source and were originally licensed under another license. For new materials we strongly encourage contributors to not use this key as materials are CC-BY, by default.
Example(s)
license: MIT
license: Apache-2.0
A dictionary/map
Example(s)
notebook: language: python pyolite: true notebook: language: python snippet: topics/climate/tutorials/pangeo-notebook/preamble.md
(Required)Free Textlanguage
Possible Values:
python
bash
r
sql
Example(s)
language: "python"
language: "bash"
language: "r"
language: "sql"
List of Items
A list of packages that must be installed before running this tutorial. This value is not currently used, but might be in the future.
Example(s)
packages: - tidyverse
Boolean
The GTN has support for JupyterLite and the Pyodide kernel which runs Python in the browser via webassembly/javascript. This comes with some restrictions:
- Python only
- No filesystem access (so no
wget
prep steps)- Little to no cell magic
However, it means we can run a lot of our Python training directly in the GTN! And in the future, hopefully, we will be able to embed individual cells of the notebook directly in the Python training, so the user doesn’t even need to switch pages.
Enabling this field will enable pyolite links for this notebook.
Free Text
If you have an alternative preamble for your notebook that students should know before following (e.g. they must load X datasets in their history), it can be listed here.
This text will be shown in the GTN tutorial, but it will not be included in the notebook, giving you a bit better control over mixing setup content which is relevant for Galaxy, with notebook content that can be easy to run for students.
Example(s)
snippet: topics/climate/tutorials/pangeo-notebook/preamble.md
List of Items
list of learning objectives for the tutorial
A learning objective is a single sentence describing what a learner will be able to do once they have done the tutorial. Generally it is best to follow a 2C or 3C learning objective such as:
- Compute (Skill)
- multiple whole genome assemblies (Objective)
- in such a way to develop big data processing skills (Result)
Example(s)
objectives: - Understand the basic concepts behind phylogenetic trees, as applied to *Mycobacterium tuberculosis* - Explore Biodiversity data with taxonomic, temporal and geographical informations - Generate a DotPlot emulating the original paper using a different analysis tool
Free Text
A custom image to show on the link preview in external applications (e.g. when the URL is pasted into Twitter)
Example(s)
og_image: /assets/images/gat.png
Required Pattern: Must match the following regular expression
/^\/.*/
Integer Number
This field allows ordering tutorials within the tutorial list. Tutorials with lower numbered priority come before tutorials with higher numbers.
Example(s)
List of Items
list of questions that will be addressed in the tutorial
Example(s)
questions: - How does Genome assembly work? - How do I change Galaxy configs? - How to detect and quantify differentially abundant proteins in a HEK-Ecoli Benchmark DIA datatset? - What kinds of data do programs store?
List of Items
A dictionary/map
(Required)Free Textdate
Required Pattern: Must match the following regular expression
/[0-9]{4}-[0-9]{2}-[0-9]{2}/
Free Text
Integer Number
List of Items
Boolean
Free Text
Free Text
Required Pattern: Must match the following regular expression
/[0-9]{2}\.[0-9]{1,2}/
Free Text
Required Pattern: Must match the following regular expression
/^(?:([0-9]*)[Hh])*(?:([0-9]*)[Mm])*(?:([0-9.]*)[Ss])*$/
List of Items
Free Text
Free Text
Required Pattern: Must match the following regular expression
/[A-Za-z0-9_-]{11}/
List of Items
If a tutorial is renamed to a new location, use this field to list prior locations from which this tutorial was accessible.
Example(s)
redirect_from: - /topics/sequence-analysis/tutorials/de-novo-rad-seq/tutorial
List of Items
List of resources that the reader of the material should be familiar with before starting this training. The structure is identical to
follow_up_training
.Example(s)
requirements: - type: internal topic_name: statistics tutorials: - age-prediction-with-ml - type: external title: The Unix Shell link: "http://swcarpentry.github.io/shell-novice/" - type: none title: "A VM with at least 2 vCPUs and 4 GB RAM, preferably running Ubuntu 18.04 - 20.04."
(Required)A dictionary/mapSequence Value (List of items)
(Required)Free Texttype
the type of link
Possible Values:
internal
external
none
Example(s)
type: "internal"
type: "external"
type: "none"
Free Text
URL of the external resource
Free Text
Title of the external resource
Free Text
[Internal Only] The name of the topic
List of Items
[Internal Only] List of required tutorials inside that topic
Free Text
if the topic has multiple subtopics defined, you can assign your tutorial to one of those subtopics here. Without this, the tutorial will appear in the “Other tutorials” section on the topic page.
Example(s)
subtopic: single-cell
List of Items
A free form list of tags that are relevant for your tutorial.
Example(s)
tags: - covid-19 - git-gat
List of Items
If alternative translations of a material are available, then use this key to indicate which languages have been manually translated.
Example(s)
translations: - en
A dictionary/map
For materials which are automatically converted into videos via the available mechanisms, this field declares which voice should be used. If this field is not declared, a random voice will be chosen from a list of the best available voices from AWS Polly.
Example(s)
voice: id: Lupe lang: es-US neural: true
(Required)Free Textid
(Required)Free Textlang
(Required)Booleanneural
Free Text
link on Zenodo to the input data for the tutorial
Example(s)
zenodo_link: https://zenodo.org/record/3706539
Required Pattern: Must match the following regular expression
/(^$|^https://zenodo.org/records?/[0-9]+/?$|^https://doi.org/10.5281/zenodo.[0-9]+/?$)/
A dictionary/map
(Required)Free Textlayout
The layout to use. Generally you should use
tutorial_slides
and no other value.Possible Values:
tutorial_slides
introduction_slides
tutorial_slides_ai4life
Example(s)
layout: "tutorial_slides"
layout: "introduction_slides"
layout: "tutorial_slides_ai4life"
(Required)Free Texttitle
Title of the slides (it will appear on the slides and the topic listing)
Example(s)
title: Introduction to CRISPR screen analysis
title: High Performance Computing for Pairwise Genome Comparison
title: Circos
(Required)A dictionary/mapcontributions
List of slide contributors. Here we break them down into several broad categories to help contributors identify how they contributed to a specific tutorial.
Example(s)
contributions: authorship: - shiltemann - bebatut editing: - hexylena - bebatut - natefoo testing: - bebatut infrastructure: - natefoo translation: - shiltemann funding: - gallantries
List of Items
These entities wrote the bulk of the training material, they may have done the analysis, built the workflow, and wrote the text themselves.
List of Items
These entities provided data for this resource
List of Items
These entities edited the text, either for spelling and grammar, flow, GTN-fit, or other similar editing categories
List of Items
These entities provided funding support for the development of this resource
List of Items
These entities managed and provided infrastructure to the GTN or for training purposes
List of Items
This person reviewed this material for accuracy and correctness
List of Items
These entities tested the tutorial to ensure it works correctly for students, or reported issues with the tutorial.
List of Items
These entities did translation and localisation work on this resource
List of Items
These entities contributed UX or Design improvements to this tutorial or the GTN as a whole
(Required)Free Textlogo
A logo identifier (e.g. GTN) should be used by default, but may be swapped out for special logos from the assets folder.
Possible Values:
GTN
assets/images/gat.png
assets/images/gga.png
assets/images/ncbi.png
/assets/images/elixir-uk.png
/assets/images/BioNT_Logo.png
topics/ai4life/images/AI4Life-logo_giraffe-nodes.png
assets/images/genomics_intro.png
shared/images/biocommons-utas.png
shared/images/dataplant-logo.png
Example(s)
logo: "GTN"
logo: "assets/images/gat.png"
logo: "assets/images/gga.png"
logo: "assets/images/ncbi.png"
logo: "/assets/images/elixir-uk.png"
logo: "/assets/images/BioNT_Logo.png"
logo: "topics/ai4life/images/AI4Life-logo_giraffe-nodes.png"
logo: "assets/images/genomics_intro.png"
logo: "shared/images/biocommons-utas.png"
logo: "shared/images/dataplant-logo.png"
Free Text
A default CSS class applied to slides
List of Items
List of tutorial contributors. Please use
contributions
instead as it provides more detailed accounting of tutorial history.Example(s)
contributors: - hexylena - shiltemann
Free Text
A copyright attribution string, as required by some licenses.
Example(s)
copyright: © Copyright 2021-2023 University of Technology Sydney, The University of Manchester UK and RO-Crate contributors
Boolean
true
to hide your tutorial from the topic page (optional). This is useful if you need a tutorial for a workshop, but have not finished making it up to GTN standards.List of Items
List of Items
list of resources that the reader of the material could follow at the end of the tutorial
Example(s)
follow_up_training: - type: internal topic_name: statistics tutorials: - age-prediction-with-ml - type: external title: The Unix Shell link: "http://swcarpentry.github.io/shell-novice/" - type: none title: "A VM with at least 2 vCPUs and 4 GB RAM, preferably running Ubuntu 18.04 - 20.04."
(Required)A dictionary/mapSequence Value (List of items)
(Required)Free Texttype
the type of link
Possible Values:
internal
external
none
Example(s)
type: "internal"
type: "external"
type: "none"
Free Text
URL of the external resource
Free Text
Title of the external resource
Free Text
[Internal Only] The name of the topic
List of Items
[Internal Only] List of required tutorials inside that topic
Free Text
Possible Values:
external
Example(s)
hands_on: "external"
Free Text
List of Items
List of take-home messages. This information will appear at the end of the slides. These should really be a key point, something that should stick in their mind; what you want them to take home from the slides.
Example(s)
key_points: - Pangeo is an inclusive community promoting open, reproducible and scalable science. - Balanced batches and replicates allow bioinformatic batch correction - Galaxy workflows can download images from the IDR, selecting specific channels, time points, z-stack positions and crop the image in different ways.
Free Text
The document language.
Possible Values:
es
en
Example(s)
lang: "es"
lang: "en"
Free Text
Here give a feeling of what level the material is at.
Possible Values:
Introductory
Intermediate
Advanced
Example(s)
level: "Introductory"
level: "Intermediate"
level: "Advanced"
Free Text
An SPDX identifier for the alternative license that is used for that particular material. This is only relevant for materials which have been imported from an external source and were originally licensed under another license. For new materials we strongly encourage contributors to not use this key as materials are CC-BY, by default.
List of Items
list of learning objectives for the tutorial
A learning objective is a single sentence describing what a learner will be able to do once they have done the tutorial. Generally it is best to follow a 2C or 3C learning objective such as:
- Compute (Skill)
- multiple whole genome assemblies (Objective)
- in such a way to develop big data processing skills (Result)
Example(s)
objectives: - Understand the basic concepts behind phylogenetic trees, as applied to *Mycobacterium tuberculosis* - Explore Biodiversity data with taxonomic, temporal and geographical informations - Generate a DotPlot emulating the original paper using a different analysis tool
Free Text
A custom image to show on the link preview in external applications (e.g. when the URL is pasted into Twitter)
Example(s)
og_image: /assets/images/gat.png
Required Pattern: Must match the following regular expression
/^\/.*/
Integer Number
This field allows ordering resources within the topic list. Learning resources with lower numbered priority come before those with higher numbers.
Example(s)
List of Items
list of questions that will be addressed in the slides
Example(s)
questions: - What is ATAC-Seq? - What are Galaxy Interactive Environments (GIEs)? - How to visualize your genome after automated annotations have been performed?
List of Items
A dictionary/map
(Required)Free Textdate
Required Pattern: Must match the following regular expression
/[0-9]{4}-[0-9]{2}-[0-9]{2}/
Free Text
Integer Number
List of Items
Free Text
Free Text
Required Pattern: Must match the following regular expression
/[0-9]{2}\.[0-9]{1,2}/
Free Text
Required Pattern: Must match the following regular expression
/^(?:([0-9]*)[Hh])*(?:([0-9]*)[Mm])*(?:([0-9.]*)[Ss])*$/
List of Items
Free Text
Free Text
Required Pattern: Must match the following regular expression
/[A-Za-z0-9_-]{9,13}/
List of Items
If a tutorial is renamed to a new location, use this field to list prior locations from which this tutorial was accessible.
Example(s)
redirect_from: - /topics/sequence-analysis/tutorials/de-novo-rad-seq/tutorial
List of Items
List of resources that the reader of the material should be familiar with before starting this training. The structure is identical to
follow_up_training
.Example(s)
requirements: - type: internal topic_name: statistics tutorials: - age-prediction-with-ml - type: external title: The Unix Shell link: "http://swcarpentry.github.io/shell-novice/" - type: none title: "A VM with at least 2 vCPUs and 4 GB RAM, preferably running Ubuntu 18.04 - 20.04."
(Required)A dictionary/mapSequence Value (List of items)
(Required)Free Texttype
the type of link
Possible Values:
internal
external
none
Example(s)
type: "internal"
type: "external"
type: "none"
Free Text
URL of the external resource
Free Text
Title of the external resource
Free Text
[Internal Only] The name of the topic
List of Items
[Internal Only] List of required tutorials inside that topic
Free Text
if the topic has multiple subtopics defined, you can assign your tutorial to one of those subtopics here. Without this, the tutorial will appear in the “Other tutorials” section on the topic page.
Example(s)
subtopic: single-cell
List of Items
A free form list of tags that are relevant for your tutorial.
Example(s)
tags: - covid-19 - git-gat
Free Text
An estimation of the time needed to complete the hands-on. It should look like 10M or 1H30M
Required Pattern: Must match the following regular expression
/^(?:([0-9]*)[Hh])*(?:([0-9]*)[Mm])*(?:([0-9.]*)[Ss])*$/
List of Items
If alternative translations of a material are available, then use this key to indicate which languages have been manually translated.
Example(s)
translations: - en
Boolean
This enables automatic slide-to-video conversion. See the documentation of that feature for more information about this feature. If enabled, you must provide good speaker notes for every single slide.
A dictionary/map
For materials which are automatically converted into videos via the available mechanisms, this field declares which voice should be used. If this field is not declared, a random voice will be chosen from a list of the best available voices from AWS Polly.
Example(s)
voice: id: Lupe lang: es-US neural: true
(Required)Free Textid
(Required)Free Textlang
(Required)Booleanneural
Decimal Number
Decimal Number
Free Text
link on Zenodo to the input data for the tutorial
Example(s)
zenodo_link: https://zenodo.org/record/3706539
GTN Resources
A dictionary/map
(Required)Free Textlayout
This must be set to
faq
Possible Values:
faq
Example(s)
layout: "faq"
(Required)Free Texttitle
Title of the FAQ
Example(s)
title: How does the GTN implement the 'Ten simple rules for collaborative lesson development'
title: How can I give feedback?
title: Ways to use Galaxy
(Required)Free Textbox_type
The type of box that should be used when rendering this FAQ. Use
none
if it should not be in a box, but just plain text.Possible Values:
tip
hands_on
question
comment
warning
details
none
Example(s)
box_type: "tip"
box_type: "hands_on"
box_type: "question"
box_type: "comment"
box_type: "warning"
box_type: "details"
box_type: "none"
(Required)List of Itemscontributors
Who contributed to this FAQ
Example(s)
contributors: - shiltemann - hexylena
Free Text
A text key used for sorting related FAQs together in the visual interface for users.
Example(s)
area: contributors
area: learners
area: features
Free Text
A short, one line description to provide additional context of the FAQ
Example(s)
description: Galaxy may have several reference genomes built-in, but you can also create your own.
description: Quickly learn what the identifiers are in any **BAM** dataset that is the result from mapping
description: Finding and Correcting Metadata
A dictionary/map
A list of _examples that can be used to illustrate the FAQ’s invocation
Example(s)
A very basic included version: {} A more complex example: {name: "Phages", format: "genbank"}
A dictionary/map
Free Text
Integer Number
An internal ID tracking which form response generated this in the GTN Google Forms. Please do not add this manually.
A dictionary/map
Optional parameters that can enhance the experience of the learner if set correctly
Example(s)
format: the format they should change it to
Free Text
List of Items
If a tutorial is renamed to a new location, use this field to list prior locations from which this tutorial was accessible.
Example(s)
redirect_from: - /topics/sequence-analysis/tutorials/de-novo-rad-seq/tutorial
A dictionary/map
A list of parameters that are required to be set when invoking the FAQ, otherwise the FAQ will not render correctly (e.g. in the FAQ list!)
Example(s)
name: The name of the dataset
Free Text
A dictionary/map
(Required)Free Textname
The internal identifier for a topic, it should be the same as the folder name.
Example(s)
name: epigenetics
name: sequence-analysis
name: admin
Required Pattern: Must match the following regular expression
/^[a-z0-9_-]+$/
(Required)Free Texttype
The type of topic, some have subtly different behaviours.
admin-dev
- should be used for admin and developer topics that are not scientifically focused.
basics
- Only used for galaxy-interface type topics
data-science
- Topics which are not necessarily Galaxy focused but expand into broader communities
use
- These topics use galaxy for some analysis
instructors
- Specific to topics related to instruction of Galaxy
Possible Values:
admin-dev
basics
data-science
use
instructors
Example(s)
type: "admin-dev"
type: "basics"
type: "data-science"
type: "use"
type: "instructors"
(Required)Free Texttitle
Title of the topic, this is displayed for users to see.
Example(s)
title: Proteomics
title: Variant Analysis
(Required)Free Textsummary
A longer description of the contents of this topic
Example(s)
summary: Statistical Analyses for omics data and machine learning using Galaxy tools
(Required)List of Itemseditorial_board
Free Text
Any custom CSS you might want to apply to a specific topic. This could be overriding e.g. the masthead colour (beware, will potentially conflict with themes.)
This is generally not a recommended property to set on topics, and something that is only used as part of outreach efforts to import content into the GTN.
Example(s)
custom_css: - :root { --brand-color: red; }
Free Text
The image ID for an image which contains all of the tools and data for this topic.
Example(s)
docker_image: quay.io/galaxy/sequence-analysis-training
Boolean
true
to hide your tutorial from the topic page (optional). This is useful if you need a tutorial for a workshop, but have not finished making it up to GTN standards.List of Items
Free Text
Link to a gitter channel that is more relevant for this topic than the default. E.g. a single cell topic, you could use
Galaxy-Training-Network/galaxy-single-cell
to link to their specific chat room in all of the child tutorials by default.Example(s)
gitter: Galaxy-Training-Network/galaxy-single-cell
gitter: galaxy-genome-annotation/Lobby
Free Text
The specific learning path you wish to reference as a call-to-action for views who aren’t sure where to get started.
It must be the name of a file in learning-pathways, without the
.md
suffix. This is not validated so, please make sure it’s correct :)Example(s)
learning_path_cta: intro-to-galaxy-and-genomics
learning_path_cta: admin-training
Free Text
A logo identifier (e.g. GTN) should be used by default, but may be swapped out for special logos from the assets folder.
Free Text
The alt text for the logo (MANDATORY).
Free Text
A custom image to show on the link preview in external applications (e.g. when the URL is pasted into Twitter)
Example(s)
og_image: /assets/images/gat.png
Required Pattern: Must match the following regular expression
/^\/.*/
List of Items
Example(s)
references: - - | authors: "Vaudel M, et al." title: "Shedding light on black boxes in protein identification." link: "https://www.ncbi.nlm.nih.gov/pubmed/24678044" summary: "An extensive tutorial for peptide and protein identification, available at http://compomics.com/bioinformatics-for-proteomics. The material is completely based on freely available and open-source tools."
(Required)A dictionary/mapSequence Value (List of items)
(Required)Free Textauthors
(Required)Free Texttitle
(Required)Free Textlink
Free Text
List of Items
List of resources that the reader of the material should be familiar with before starting this training. The structure is identical to
follow_up_training
.Example(s)
requirements: - type: internal topic_name: statistics tutorials: - age-prediction-with-ml
(Required)A dictionary/mapSequence Value (List of items)
(Required)Free Texttype
the type of link
Possible Values:
internal
Example(s)
type: "internal"
Free Text
The name of the topic
List of Items
List of required tutorials inside that topic
List of Items
For large topics, we can define subtopics and create multiple tutorial lists, which separates the tutorials to help users find content that interests them more quickly.
A dictionary/map
(Required)Free Textid
Subtopic ID, this should match what is used in tutorials.
Example(s)
id: single-cell
Required Pattern: Must match the following regular expression
/^[A-Za-z0-9_-]+$/
(Required)Free Texttitle
Subtopic title, which is displayed for users to see.
Example(s)
title: Maintaining a Production Galaxy
title: Single-cell RNA-seq
(Required)Free Textdescription
A human readable textual description of a subtopic.
Example(s)
description: - "Start here if you are new to RNA-Seq analysis in Galaxy" - "These tutorials take you from raw sequencing reads to pathway analysis" - "Tutorials about analysis of single-cell RNA-seq data" - "Tutorials using a single published single-cell RNA-seq dataset for a variety of analyses"
Boolean
false
to hide your topic from the production GTN. This is useful if you need a topic for a workshop, but have not finished making it up to GTN standards.Boolean
If this is a tag based topic (no tutorials of it’s own) then you must set this flag to indicate it as such, otherwise you will find yourself with an empty topic page.
Free Text
These are used to organise the home page tutorials only, not used anywhere else.
Possible Values:
technology
field
Example(s)
topic_type: "technology"
topic_type: "field"
A dictionary/map
(Required)Free Texttitle
Title of the Quiz
Example(s)
title: Diagnostic Assessment
title: SQL Basics Recap
(Required)List of Itemscontributors
Who contributed to this FAQ
Example(s)
contributors: - shiltemann - hexylena
(Required)List of Itemsquestions
The questions that are part of the quiz
A dictionary/map
(Required)Free Texttitle
The question title, displayed on the teacher and student screens simultaneously
Example(s)
title: How you could collect information from learners at the beginning of a course or lesson and how you can use it?
title: What keyword do you use to retrieve data in SQL
(Required)Integer Numbertimeout
How long the students have to answer the question
(Required)Free Texttype
What type of question to display.
Possible Values:
choose-1
choose-many
free-text
poll
Example(s)
type: "choose-1"
type: "choose-many"
type: "free-text"
type: "poll"
List of Items
The possible answers to the question you’ve asked. Consider including common wrong answers, or answers based on common mistakes to help students identify where they went wrong.
Example(s)
answers: - OBTAIN - SELECT - RETRIEVE - RETURN
The correct answer, it MUST be part of the answers list. It can be a list of correct answers if it is a choose-many question
Example(s)
correct: SELECT
correct: AB
Free Text
Path to an image, if you’d like to include one along with the question. Should be the full path starting with /
Example(s)
image: /training-material/topics/data-science/images/carpentries-sql/sql-join-structure.svg
Boolean
Used ONLY with the poll type questions to enable displaying the results as they come in. Great for polling audiences for how they’re feeling.
A dictionary/map
(Required)Free Texttitle
Title of the pathway
Example(s)
title: Clustering in Machine Learning
title: Breve introducción a Galaxy - en español
title: Pangeo ecosystem 101 for everyone - Introduction to Xarray Galaxy Tools
(Required)Free Textdescription
Description of the pathway
(Required)Free Texttype
The type of topic, some have subtly different behaviours.
admin-dev
- should be used for admin and developer topics that are not scientifically focused.
basics
- Only used for galaxy-interface type topics
data-science
- Topics which are not necessarily Galaxy focused but expand into broader communities
use
- These topics use galaxy for some analysis
instructors
- Specific to topics related to instruction of Galaxy
Possible Values:
admin-dev
basics
data-science
use
instructors
Example(s)
type: "admin-dev"
type: "basics"
type: "data-science"
type: "use"
type: "instructors"
(Required)List of Itemseditorial_board
(Required)List of Itemstags
Any relevant tags that would help a user discover this LP
(Required)List of Itemspathway
A dictionary/map
(Required)Free Textsection
Free Text
List of Items
A dictionary/map
(Required)Free Textname
Boolean
Free Text
Free Text
Possible Values:
admin
covid19
ai4life
assembly
climate
computational-chemistry
contributing
data-science
dev
ecology
epigenetics
evolution
fair
galaxy-interface
genome-annotation
imaging
introduction
metabolomics
microbiome
proteomics
sequence-analysis
single-cell
statistics
synthetic-biology
teaching
transcriptomics
variant-analysis
visualisation
Example(s)
topic: "admin"
topic: "covid19"
topic: "ai4life"
topic: "assembly"
topic: "climate"
topic: "computational-chemistry"
topic: "contributing"
topic: "data-science"
topic: "dev"
topic: "ecology"
topic: "epigenetics"
topic: "evolution"
topic: "fair"
topic: "galaxy-interface"
topic: "genome-annotation"
topic: "imaging"
topic: "introduction"
topic: "metabolomics"
topic: "microbiome"
topic: "proteomics"
topic: "sequence-analysis"
topic: "single-cell"
topic: "statistics"
topic: "synthetic-biology"
topic: "teaching"
topic: "transcriptomics"
topic: "variant-analysis"
topic: "visualisation"
Free Text
Possible Values:
hands_on
slides
Example(s)
type: "hands_on"
type: "slides"
Free Text
cover image
Free Text
cover image alt text
Boolean
true
to hide your LP from the LP list (optional). This is useful if you need an LP for a workshop, but have not finished making it up to GTN standards.List of Items
These entities provided funding support for the development of this resource
Free Text
Possible Values:
learning-pathway
Example(s)
layout: "learning-pathway"
Integer Number
priority within learning path list
A dictionary/map
(Required)Free Textlayout
Possible Values:
news
Example(s)
layout: "news"
(Required)Free Texttitle
Title of the news post
Example(s)
title: BY-COVID and RO-Crate collaboration brings new topic: FAIR Data, Workflows & More
title: New Tutorial Feature: Choose Your Own Tutorial
(Required)A dictionary/mapcontributions
List of tutorial contributors. Here we break them down into several broad categories to help contributors identify how they contributed to a specific tutorial.
Example(s)
contributions: authorship: - shiltemann - bebatut editing: - hexylena - bebatut - natefoo testing: - bebatut infrastructure: - natefoo translation: - shiltemann funding: - gallantries
List of Items
These entities wrote the bulk of the training material, they may have done the analysis, built the workflow, and wrote the text themselves.
List of Items
These entities provided data for this resource
List of Items
These entities edited the text, either for spelling and grammar, flow, GTN-fit, or other similar editing categories
List of Items
These entities provided funding support for the development of this resource
List of Items
These entities managed and provided infrastructure to the GTN or for training purposes
List of Items
This person reviewed this material for accuracy and correctness
List of Items
These entities tested the tutorial to ensure it works correctly for students, or reported issues with the tutorial.
List of Items
These entities did translation and localisation work on this resource
List of Items
These entities contributed UX or Design improvements to this tutorial or the GTN as a whole
A dictionary/map
A dictionary of abbreviations and their expansions.
Example(s)
abbreviations: SQL: Structured Query Language API: Application Programming Interface
Free Text
The expansion of the abbreviated term.
List of Items
List of tutorial contributors. Please use
contributions
instead as it provides more detailed accounting of tutorial history.Example(s)
contributors: - hexylena - shiltemann
Free Text
link to a picture that will be used as the cover for the article
Example(s)
cover: assets/images/BYCOVID_logo_tagline.png
Free Text
If a cover is provided, then alt text is Mandatory.
Example(s)
coveralt: logo of by covid with subtitle reading beyond covid
Boolean
Whether clicking on the “read story link” goes directly to another site.
Possible Values:
true
false
Example(s)
external: true
external: false
Boolean
A boolean tracking in an automated way if this news post was generated via the GTN’s News Google Form. Please do not add this manually.
Possible Values:
true
false
Example(s)
from_google_form: true
from_google_form: false
Free Text
Basically an alias for tutorial, except requiring a full URL
Example(s)
link: https://example.org
List of Items
If a tutorial is renamed to a new location, use this field to list prior locations from which this tutorial was accessible.
Example(s)
redirect_from: - /topics/sequence-analysis/tutorials/de-novo-rad-seq/tutorial
List of Items
A free form list of tags that are relevant for your tutorial.
Example(s)
tags: - new topic - new tutorial - new feature - covid-19 - git-gat
Free Text
Include a link to a specific page as a call to action button at the bottom of the page.
Example(s)
tutorial: topics/sequence-analysis/tutorials/de-novo-rad-seq/tutorial.html
A dictionary/map
(Required)Free Textlayout
This must be set to
event
Possible Values:
event
Example(s)
layout: "event"
(Required)Free Texttitle
Title of the event
Example(s)
title: Smörgåsbord 2023
title: MTS Basics Workshop
(Required)A dictionary/mapcontributions
List of tutorial contributors. Here we break them down into several broad categories to help contributors identify how they contributed to a specific tutorial.
Example(s)
contributions: organisers: - shiltemann - bebatut instructors: - hexylena - bebatut - natefoo testing: - bebatut infrastructure: - natefoo funding: - gallantries
List of Items
These entities provided funding support for the development of this resource
List of Items
These entities managed and provided infrastructure to the GTN or for training purposes
List of Items
These entities helped or instructed at the event
List of Items
These entities organised the event
List of Items
This person reviewed this material for accuracy and correctness
List of Items
These entities tested the tutorial to ensure it works correctly for students, or reported issues with the tutorial.
List of Items
These entities did translation and localisation work on this resource
(Required)Free Textdescription
A brief description of the event.
(Required)Free Textcost
Price of the event. If the event is free, use the word
free
. If there is a cost, use the currency and amount.Example(s)
cost: free
cost: 123 EUR
cost: 456 USD
Required Pattern: Must match the following regular expression
/(free|\d+ [A-Z]{3})/
(Required)Free Textmode
The mode of the event. For some reason the schema.org markup for this provides three separate axes (online/onsite/blended, synchronous/asynchronous, and full-time/part-time), but we’re just going to use the first axis because there is no way to represent choices from each axis. Why, schema.org why‽ If you want to record async/sync please do so in the separate attribute, and we will not record full/part time.
Possible Values:
online
onsite
hybrid
Example(s)
mode: "online"
mode: "onsite"
mode: "hybrid"
Boolean
true
for an asynchronous event. If this is true, we will not display any value fortime
s in the columns of the programFree Text
Example(s)
audience: This event is intended for PhD students interested in Genomics. A basic knowledge in R is useful but not required.
Free Text
Free Text
link to a picture that will be used as the cover for the article
Example(s)
cover-image: /assets/images/BYCOVID_logo_tagline.png
Required Pattern: Must match the following regular expression
/^\/.*(.png|.jpg|.jpeg)/
Free Text
If a cover is provided, then alt text is Mandatory.
Example(s)
cover-image-alt: logo of by covid with subtitle reading beyond covid
When the event ends
Example(s)
date_end: 2024-04-01
When the event starts
Example(s)
date_start: 2024-04-01
Boolean
true
to hide your event. This is useful if you need a tutorial for a workshop, but have not finished making it up to GTN standards.A dictionary/map
Link to the feedback form
(Required)Free Textlink
(Required)deadline
A dictionary/map
Link to the feedback form
A dictionary/map
Free Text
Custom markdown formatted text to display. Note that Jekyll things like
{% snippet %}
or{% include %}
will not work here.Boolean
Set to
true
to disable the automatic “register for a galaxy account” card.List of Items
A dictionary/map
Free Text
A human readable name for the server
Free Text
The URL of the server
Free Text
The TIaaS URL. If you don’t have one officially yet, just set it provisionally (we’ll generate a link which will make it easier to request it!)
A dictionary/map
Free Text
A channel identifier for the platform, instructors can create channels on the GTN slack themselves.
Free Text
Invite link for the platform, GTN slack by default
Free Text
Link to the channel
Free Text
The name of the platform
Possible Values:
Slack
Example(s)
platform: "Slack"
Boolean
Indicate that you will be using TIaaS for this event
A dictionary/map
Physical location of the event, only required for in-person events
Example(s)
location: name: Zoom location: name: Bioinf Dept address: 42 E Main St. city: Reyjkjavik country: Iceland
(Required)Free Textname
Free Text
Free Text
Free Text
A dictionary/map
Decimal Number
Decimal Number
Free Text
Free Text
List of Items
A dictionary/map
(Required)Free Textsection
Free Text
Boolean
Treat this section as a subsection of the previous item
List of Items
A dictionary/map
Free Text
Free Text
List of Items
A dictionary/map
Free Text
Description of the custom session here, in markdown.
Free Text
Free Text
Free Text
Free Text
Possible Values:
custom
Example(s)
type: "custom"
List of Items
If a tutorial is renamed to a new location, use this field to list prior locations from which this tutorial was accessible.
Example(s)
redirect_from: - /topics/sequence-analysis/tutorials/de-novo-rad-seq/tutorial
A dictionary/map
Link to the registration page
(Required)Free Textlink
(Required)deadline
Boolean
Free Text
The status of the event.
wip
for work in progress, otherwise, do not set this key.Possible Values:
wip
Example(s)
status: "wip"
List of Items
A free form list of tags that are relevant for your tutorial.
Example(s)
tags: - covid-19 - git-gat
A dictionary/map
(Required)Free Textlayout
This must be set to
event-external
Possible Values:
event-external
Example(s)
layout: "event-external"
(Required)Free Textexternal
URL to the external event
(Required)Free Texttitle
Title of the event
Example(s)
title: Smörgåsbord 2023
title: MTS Basics Workshop
(Required)A dictionary/mapcontributions
List of tutorial contributors. Here we break them down into several broad categories to help contributors identify how they contributed to a specific tutorial.
Example(s)
contributions: organisers: - shiltemann - bebatut instructors: - hexylena - bebatut - natefoo testing: - bebatut infrastructure: - natefoo funding: - gallantries
List of Items
These entities provided funding support for the development of this resource
List of Items
These entities managed and provided infrastructure to the GTN or for training purposes
List of Items
These entities helped or instructed at the event
List of Items
These entities organised the event
List of Items
This person reviewed this material for accuracy and correctness
List of Items
These entities tested the tutorial to ensure it works correctly for students, or reported issues with the tutorial.
List of Items
These entities did translation and localisation work on this resource
(Required)Free Textdescription
A brief description of the event.
When the event ends
Example(s)
date_end: 2024-04-01
When the event starts
Example(s)
date_start: 2024-04-01
Boolean
true
to hide your event. This is useful if you need a tutorial for a workshop, but have not finished making it up to GTN standards.Integer Number
An internal ID tracking which form response generated this in the GTN Google Forms. Please do not add this manually.
A dictionary/map
Physical location of the event, only required for in-person events
Example(s)
location: name: Zoom location: name: Bioinf Dept address: 42 E Main St. city: Reyjkjavik country: Iceland
(Required)Free Textname
Free Text
Free Text
Free Text
A dictionary/map
Decimal Number
Decimal Number
Free Text
Free Text
Contributors
A dictionary/map
Example(s)
hexylena: name: Helena twitter: hexylena bio: I wrote this documentation! I do super cool things.
A dictionary/map
This ideally is your GitHub handle. If you do not have, or do not wish to provide a GitHub username, you may make up another identifier here, but then you must set
github: false
as described below.(Required)Free Textname
Your preferred name. If you prefer an alias or another name, this is welcome, it does not need to be your legal name.
Example(s)
name: 张三
name: Alice
name: Jane Doe
name: Madame Tout-le-Monde
name: Γιάννης Παπαδόπουλος
(Required)Free Textjoined
The year and month in which you joined
Example(s)
joined: 2020-01
Required Pattern: Must match the following regular expression
/[0-9]{4,}-[0-9]{2}/
List of Items
A set of organisations or grants your are affiliated with
Free Text
Free Text
A short biography of yourself, if you wish to add additional details or context.
Example(s)
bio: Research at the [South African National Bioinformatics Institute](https://www.sanbi.ac.za/)
Free Text
Your bluesky handle
Example(s)
bluesky: gtn.bsky.social
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z.]+/
Boolean
Are you open to being contacted for hosting training, or being involved with local training events? Instructors might use this to contact you, if they are looking for regional trainers who can help with their event.
Free Text
The 2 letter code identifying the ELIXIR node to which you are a member or are associated with. If you are from norway, you will need to quote your value,
"no"
, unlike everyone else, due to the Norway Problem with YAMLPossible Values:
au
be
ch
cz
de
dk
ee
es
fi
fr
gr
hu
ie
il
it
lu
nl
no
pt
se
si
uk
Example(s)
elixir_node: "au"
elixir_node: "be"
elixir_node: "ch"
elixir_node: "cz"
elixir_node: "de"
elixir_node: "dk"
elixir_node: "ee"
elixir_node: "es"
elixir_node: "fi"
elixir_node: "fr"
elixir_node: "gr"
elixir_node: "hu"
elixir_node: "ie"
elixir_node: "il"
elixir_node: "it"
elixir_node: "lu"
elixir_node: "nl"
elixir_node: "no"
elixir_node: "pt"
elixir_node: "se"
elixir_node: "si"
elixir_node: "uk"
Free Text
Your email address, if you wish to provide it.
Example(s)
email: jane.doe@gmail.com
Required Pattern: Must match the following regular expression
/@/
Free Text
The URL to your fediverse profile
Example(s)
fediverse: http://genomic.social/@abretaud
Required Pattern: Must match the following regular expression
/^https:\/\/[0-9a-zA-Z.]+/@?[0-9a-zA-Z.]+$/
Free Text
The flavor of the fediverse server (used in our webfinger endpoint.)
Possible Values:
mastodon
akkoma
Example(s)
fediverse_flavor: "mastodon"
fediverse_flavor: "akkoma"
List of Items
A set of organisations you were previously affiliated with
Boolean
If your identifier in this file is not a GitHub account (or not your account), then this must be set to true, so we do not link to that account.
Free Text
Set this to
no
if you would like to be excluded from the hall of fame.Possible Values:
no
Example(s)
halloffame: "no"
Free Text
If this community member is deceased, you can use this field to write a small in memoriam section that will display in their Hall of Fame profile.
Free Text
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z]+/
A dictionary/map
Free Text
The country you work in, ISO-3166-2 code.
Example(s)
country: NL
country: DE
Decimal Number
Latitude in decimal numbers
Example(s)
lat: 4.12
Decimal Number
Longitude in decimal numbers
Example(s)
lon: 55.0
Free Text
Preferred contact method
Free Text
Your matrix identifier and home server
Example(s)
matrix: hexylena:matrix.org
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z]+:.*/
Free Text
Your identifier at orcid.org
Example(s)
orcid: 0000-0001-9760-8992
Required Pattern: Must match the following regular expression
/[0-9A-Z]{4}-[0-9A-Z]{4}-[0-9A-Z]{4}-[0-9A-Z]{4}/
Free Text
Your twitter handle, without the
@
Example(s)
twitter: gxytraining
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z]+/
A dictionary/map
Example(s)
elixir: name: ELIXIR bio: We contribute as an organisation!
A dictionary/map
This ideally is your GitHub handle. If you do not have, or do not wish to provide a GitHub username, you may make up another identifier here, but then you must set
github: false
as described below.(Required)Free Textname
Full name of the organisation (e.g. acronyms expanded).
Example(s)
name: European Bioinformatics Institute
name: University of Freiburg
name: National Institutes of Health
Free Text
Free Text
A short biography of yourself, if you wish to add additional details or context.
Example(s)
bio: Research at the [South African National Bioinformatics Institute](https://www.sanbi.ac.za/)
Free Text
A couple sentences of description about the organisation
Free Text
Your email address, if you wish to provide it.
Example(s)
email: jane.doe@gmail.com
Required Pattern: Must match the following regular expression
/@/
Free Text
The URL to your fediverse profile
Example(s)
fediverse: http://genomic.social/@abretaud
Required Pattern: Must match the following regular expression
/^https:\/\/[0-9a-zA-Z.]+/@?[0-9a-zA-Z.]+$/
Free Text
The flavor of the fediverse server (used in our webfinger endpoint.)
Possible Values:
mastodon
akkoma
Example(s)
fediverse_flavor: "mastodon"
fediverse_flavor: "akkoma"
Boolean
If your identifier in this file is not a GitHub account (or not your account), then this must be set to true, so we do not link to that account.
Free Text
The year and month in which you joined
Example(s)
joined: 2020-01
Required Pattern: Must match the following regular expression
/[0-9]{4,}-[0-9]{2}/
Free Text
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z]+/
Free Text
Your matrix identifier and home server
Example(s)
matrix: hexylena:matrix.org
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z]+:.*/
Free Text
Your identifier at orcid.org
Example(s)
orcid: 0000-0001-9760-8992
Required Pattern: Must match the following regular expression
/[0-9A-Z]{4}-[0-9A-Z]{4}-[0-9A-Z]{4}-[0-9A-Z]{4}/
Free Text
ROR ID from https://ror.org/
Example(s)
ror: 019w4f821
Free Text
Name of the organisation, as short as possible (e.g. acronyms)
Example(s)
short_name: EBI
short_name: UFR
short_name: NIH
Free Text
Your twitter handle, without the
@
Example(s)
twitter: gxytraining
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z]+/
Free Text
associated webpage (NOTE, funders only!)
Example(s)
url: https://elixir-europe.org
A dictionary/map
Example(s)
erasmusplus: name: Erasmus+ bio: We funded some of this work!
A dictionary/map
This ideally is your GitHub handle. If you do not have, or do not wish to provide a GitHub username, you may make up another identifier here, but then you must set
github: false
as described below.(Required)Free Textname
The full name for the grant
Example(s)
name: {"Gallantries"=>"Bridging Training Communities in Life Science, Environment and Health"}
(Required)Free Textfunding_id
The short identifier for your grant.
Example(s)
funding_id: 2020-1-NL01-KA203-064717
Free Text
Free Text
A short biography of yourself, if you wish to add additional details or context.
Example(s)
bio: Research at the [South African National Bioinformatics Institute](https://www.sanbi.ac.za/)
Free Text
Your email address, if you wish to provide it.
Example(s)
email: jane.doe@gmail.com
Required Pattern: Must match the following regular expression
/@/
Free Text
The end date of the grant
Example(s)
end_date: 2020-01-01
Required Pattern: Must match the following regular expression
/[0-9]{4,}-[0-9]{2}-[0-9]{2}/
Free Text
The URL to your fediverse profile
Example(s)
fediverse: http://genomic.social/@abretaud
Required Pattern: Must match the following regular expression
/^https:\/\/[0-9a-zA-Z.]+/@?[0-9a-zA-Z.]+$/
Free Text
The flavor of the fediverse server (used in our webfinger endpoint.)
Possible Values:
mastodon
akkoma
Example(s)
fediverse_flavor: "mastodon"
fediverse_flavor: "akkoma"
Free Text
A name for the agency providing the funding.
Example(s)
funder_name: Erasmus+ Programme
Free Text
Automatically link to the grant’s information in the appropriate funding system site.
Possible Values:
cordis
erasmusplus
ukri
highergov
Example(s)
funding_database: "cordis"
funding_database: "erasmusplus"
funding_database: "ukri"
funding_database: "highergov"
Free Text
A short statement about the funder, markdown is supported.
Example(s)
funding_statement: This project ([`2020-1-NL01-KA203-064717`](https://erasmus-plus.ec.europa.eu/projects/search/details/2020-1-NL01-KA203-064717)) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
Boolean
If your identifier in this file is not a GitHub account (or not your account), then this must be set to true, so we do not link to that account.
Free Text
The year and month in which you joined
Example(s)
joined: 2020-01
Required Pattern: Must match the following regular expression
/[0-9]{4,}-[0-9]{2}/
Free Text
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z]+/
Free Text
Your matrix identifier and home server
Example(s)
matrix: hexylena:matrix.org
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z]+:.*/
Free Text
Your identifier at orcid.org
Example(s)
orcid: 0000-0001-9760-8992
Required Pattern: Must match the following regular expression
/[0-9A-Z]{4}-[0-9A-Z]{4}-[0-9A-Z]{4}-[0-9A-Z]{4}/
Free Text
A shorter name, as some grants love to stuff a lot of words into the title
Example(s)
short_name: Gallantries
Free Text
The start date of the grant
Example(s)
start_date: 2020-01-01
Required Pattern: Must match the following regular expression
/[0-9]{4,}-[0-9]{2}-[0-9]{2}/
Free Text
Your twitter handle, without the
@
Example(s)
twitter: gxytraining
Required Pattern: Must match the following regular expression
/[0-9a-zA-Z]+/
Free Text
associated webpage
Example(s)
url: https://elixir-europe.org