Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

Anne Pajon avatar Anne Pajonorcid logoAnthony Bretaudeau avatar Anthony BretaudeauSarah Peter avatar Sarah PeterMatthias Bernt avatar Matthias BerntDonny Vrins avatar Donny Vrinsorcid logoTeresa Müller avatar Teresa Müllerorcid logoAnna Syme avatar Anna Symeorcid logoArmin Dadras avatar Armin Dadrasorcid logoBjörn Grüning avatar Björn Grüningorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoSaskia Hiltemann avatar Saskia HiltemannNiall Beard avatar Niall BeardOlha Nahorna avatar Olha Nahornaorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoHelena Rasche avatar Helena Rascheorcid logoDave Clements avatar Dave Clementsorcid logoFlorian Heyl avatar Florian Heylorcid logoMorgan Howells avatar Morgan Howellsorcid logoMartin Čech avatar Martin Čechorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoTristan Reynolds avatar Tristan ReynoldsMélanie Petera avatar Mélanie PeteraAnton Nekrutenko avatar Anton Nekrutenkoorcid logoAnne Fouilloux avatar Anne FouillouxGareth Price avatar Gareth Priceorcid logoMelanie Föll avatar Melanie Föllorcid logoWendi Bacon avatar Wendi Baconorcid logoNate Coraor avatar Nate CoraorDilmurat Yusuf avatar Dilmurat YusufSebastian Schaaf avatar Sebastian Schaaforcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoWolfgang Maier avatar Wolfgang MaierAndrea Bagnacani avatar Andrea Bagnacaniorcid logoNadia Goué avatar Nadia GouéDavid López avatar David LópezJoachim Wolff avatar Joachim Wolfforcid logoMaria Doyle avatar Maria Doyleorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoLucille Delisle avatar Lucille DelisleMehmet Tekman avatar Mehmet Tekmanorcid logoRand Zoabi avatar Rand Zoabiorcid logoClemens Blank avatar Clemens Blankorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoNicola Soranzo avatar Nicola SoranzoChristopher Barnett avatar Christopher BarnettMirela Minkova avatar Mirela MinkovaGildas Le Corguillé avatar Gildas Le CorguilléYongbin Li avatar Yongbin LiWilliam Durand avatar William DurandScott Cain avatar Scott Cainorcid logoPhil Reed avatar Phil ReedAlaa Elghamry avatar Alaa Elghamryorcid logoMarisa Loach avatar Marisa Loachorcid logoAnup Kumar avatar Anup Kumarorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonMichele Maroni avatar Michele Maroniorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoBérénice Batut avatar Bérénice BatutGoodnews Sandy avatar Goodnews SandyMarius van den Beek avatar Marius van den Beekorcid logoJohn Davis avatar John Davisorcid logoRenato Alves avatar Renato Alvesorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoAlex Ostrovsky avatar Alex OstrovskyCyril Monjeaud avatar Cyril Monjeaud

Funding

These individuals or organisations provided funding support for the development of this resource