Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoNate Coraor avatar Nate CoraorAndrea Bagnacani avatar Andrea BagnacaniDonny Vrins avatar Donny Vrinsorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoNadia Goué avatar Nadia Gouéorcid logoJohn Davis avatar John Davisorcid logoClemens Blank avatar Clemens BlankOlha Nahorna avatar Olha NahornaSarah Peter avatar Sarah PeterAnton Nekrutenko avatar Anton Nekrutenkoorcid logoMarisa Loach avatar Marisa LoachWilliam Durand avatar William Durandorcid logoAnna Syme avatar Anna Symeorcid logoPhil Reed avatar Phil Reedorcid logoMelanie Föll avatar Melanie FöllGildas Le Corguillé avatar Gildas Le Corguilléorcid logoMartin Čech avatar Martin Čechorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoBérénice Batut avatar Bérénice Batutorcid logoBjörn Grüning avatar Björn Grüningorcid logoArmin Dadras avatar Armin Dadrasorcid logoFlorian Heyl avatar Florian Heylorcid logoBert Droesbeke avatar Bert DroesbekeMirela Minkova avatar Mirela Minkovaorcid logoMorgan Howells avatar Morgan HowellsGareth Price avatar Gareth PriceCyril Monjeaud avatar Cyril Monjeaudorcid logoAhmed Hamid Awan avatar Ahmed Hamid AwanMarius van den Beek avatar Marius van den BeekSebastian Schaaf avatar Sebastian Schaaforcid logoHelena Rasche avatar Helena Rascheorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoDave Clements avatar Dave Clementsorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoLucille Delisle avatar Lucille Delisleorcid logoCristóbal Gallardo avatar Cristóbal GallardoAlaa Elghamry avatar Alaa Elghamryorcid logoMaria Doyle avatar Maria DoyleDavid López avatar David Lópezorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoWendi Bacon avatar Wendi Baconorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoDaniel Blankenberg avatar Daniel BlankenbergGoodnews Sandy avatar Goodnews SandyChristopher Barnett avatar Christopher BarnettJoachim Wolff avatar Joachim Wolfforcid logoRenato Alves avatar Renato AlvesMehmet Tekman avatar Mehmet TekmanNiall Beard avatar Niall Beardorcid logoTeresa Müller avatar Teresa MüllerYongbin Li avatar Yongbin Liorcid logoWolfgang Maier avatar Wolfgang MaierAnne Pajon avatar Anne PajonMichele Maroni avatar Michele MaroniMélanie Petera avatar Mélanie Peteraorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoScott Cain avatar Scott CainMatthias Bernt avatar Matthias Berntorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonDilmurat Yusuf avatar Dilmurat Yusuf

Funding

These individuals or organisations provided funding support for the development of this resource