Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoAnne Fouilloux avatar Anne FouillouxScott Cain avatar Scott Cainorcid logoPhil Reed avatar Phil Reedorcid logoMarius van den Beek avatar Marius van den Beekorcid logoAnup Kumar avatar Anup KumarAlaa Elghamry avatar Alaa Elghamryorcid logoNate Coraor avatar Nate Coraororcid logoBérénice Batut avatar Bérénice Batutorcid logoMelanie Föll avatar Melanie Föllorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoWendi Bacon avatar Wendi Baconorcid logoArmin Dadras avatar Armin Dadrasorcid logoNadia Goué avatar Nadia Gouéorcid logoAnna Syme avatar Anna Symeorcid logoClemens Blank avatar Clemens Blankorcid logoDaniel Blankenberg avatar Daniel BlankenbergMirela Minkova avatar Mirela Minkovaorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoYvan Le Bras avatar Yvan Le BrasChristopher Barnett avatar Christopher Barnettorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoHelena Rasche avatar Helena Rascheorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoPavankumar Videm avatar Pavankumar VidemAnne Pajon avatar Anne Pajonorcid logoJohn Davis avatar John Davisorcid logoCristóbal Gallardo avatar Cristóbal GallardoDilmurat Yusuf avatar Dilmurat Yusuforcid logoMarisa Loach avatar Marisa LoachWilliam Durand avatar William Durandorcid logoTeresa Müller avatar Teresa MüllerGoodnews Sandy avatar Goodnews SandyAnton Nekrutenko avatar Anton Nekrutenkoorcid logoLucille Delisle avatar Lucille DelisleSarah Peter avatar Sarah Peterorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzJoachim Wolff avatar Joachim Wolfforcid logoMaria Doyle avatar Maria Doyleorcid logoBjörn Grüning avatar Björn Grüningorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoFlorian Heyl avatar Florian HeylMélanie Pétéra avatar Mélanie Pétéraorcid logoNicola Soranzo avatar Nicola SoranzoMichele Maroni avatar Michele MaroniNiall Beard avatar Niall BeardGildas Le Corguillé avatar Gildas Le Corguilléorcid logoDaniela Schneider avatar Daniela SchneiderCyril Monjeaud avatar Cyril Monjeaudorcid logoMartin Čech avatar Martin Čechorcid logoAlex Ostrovsky avatar Alex OstrovskyGareth Price avatar Gareth Priceorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoMorgan Howells avatar Morgan Howellsorcid logoDave Clements avatar Dave Clementsorcid logoRenato Alves avatar Renato Alvesorcid logoMatthias Bernt avatar Matthias BerntDonny Vrins avatar Donny Vrinsorcid logoRand Zoabi avatar Rand Zoabiorcid logoTristan Reynolds avatar Tristan ReynoldsOlha Nahorna avatar Olha NahornaSebastian Schaaf avatar Sebastian SchaafMehmet Tekman avatar Mehmet TekmanYongbin Li avatar Yongbin Liorcid logoAhmed Hamid Awan avatar Ahmed Hamid AwanAndrea Bagnacani avatar Andrea BagnacaniDavid López avatar David Lópezorcid logoAnthony Bretaudeau avatar Anthony Bretaudeau

Funding

These individuals or organisations provided funding support for the development of this resource