Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy
español
    Video Languages

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
galaxy-intro
Introduction to Digital Humanities in Galaxy
text mining
Introduction to Galaxy as an RDM platform
galaxy-intro fair

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
cyoa galaxy-intro
From peaks to genes
deutsch español italiano
How to reproduce published Galaxy analyses
galaxy-intro
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
fair how-to-cite-galaxy
Introduction to the Dataverse Integration in Galaxy

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Alaa Elghamry avatar Alaa Elghamryorcid logoAnna Syme avatar Anna SymeGoodnews Sandy avatar Goodnews Sandyorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoMelanie Föll avatar Melanie Föllorcid logoMorgan Howells avatar Morgan Howellsorcid logoAnthony Bretaudeau avatar Anthony BretaudeauMirela Minkova avatar Mirela MinkovaDilmurat Yusuf avatar Dilmurat YusufGildas Le Corguillé avatar Gildas Le CorguilléMélanie Petera avatar Mélanie Peteraorcid logoMaria Doyle avatar Maria Doyleorcid logoClemens Blank avatar Clemens BlankSebastian Schaaf avatar Sebastian Schaaforcid logoPavankumar Videm avatar Pavankumar Videmorcid logoTeresa Müller avatar Teresa Müllerorcid logoMartin Čech avatar Martin Čechorcid logoLucille Delisle avatar Lucille DelisleCyril Monjeaud avatar Cyril Monjeaudorcid logoBérénice Batut avatar Bérénice BatutScott Cain avatar Scott Cainorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoRand Zoabi avatar Rand Zoabiorcid logoNate Coraor avatar Nate CoraorAnton Nekrutenko avatar Anton NekrutenkoNiall Beard avatar Niall BeardAnne Pajon avatar Anne Pajonorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoArmin Dadras avatar Armin DadrasMehmet Tekman avatar Mehmet Tekmanorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoRenato Alves avatar Renato Alvesorcid logoHelena Rasche avatar Helena RascheGareth Price avatar Gareth Priceorcid logoDave Clements avatar Dave Clementsorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoJoachim Wolff avatar Joachim WolffMichele Maroni avatar Michele Maroniorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoMatthias Bernt avatar Matthias Berntorcid logoNadia Goué avatar Nadia GouéWilliam Durand avatar William Durandorcid logoJohn Davis avatar John Davisorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoPhil Reed avatar Phil Reedorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoYvan Le Bras avatar Yvan Le BrasDavid López avatar David Lópezorcid logoMarisa Loach avatar Marisa Loachorcid logoBjörn Grüning avatar Björn Grüningorcid logoWendi Bacon avatar Wendi Baconorcid logoDaniela Schneider avatar Daniela SchneiderOlha Nahorna avatar Olha Nahornaorcid logoFlorian Heyl avatar Florian HeylSarah Peter avatar Sarah Peterorcid logoMarius van den Beek avatar Marius van den Beekorcid logoAnup Kumar avatar Anup KumarAndrea Bagnacani avatar Andrea BagnacaniYongbin Li avatar Yongbin LiChristopher Barnett avatar Christopher BarnettDonny Vrins avatar Donny Vrins

Funding

These individuals or organisations provided funding support for the development of this resource

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ErasmusMC
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MWK
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ELIXIR Europe
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Melbourne Bioinformatics
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DataPLANT
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SURF
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PSU
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Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
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de.NBI
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de.KCD
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Australian BioCommons
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The University of Melbourne
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UFR