Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

Goodnews Sandy avatar Goodnews SandyMichele Maroni avatar Michele MaroniOlha Nahorna avatar Olha Nahornaorcid logoAnup Kumar avatar Anup Kumarorcid logoMartin Čech avatar Martin Čechorcid logoClemens Blank avatar Clemens Blankorcid logoRand Zoabi avatar Rand ZoabiDavid López avatar David Lópezorcid logoAlex Ostrovsky avatar Alex OstrovskyScott Cain avatar Scott Cainorcid logoMaria Doyle avatar Maria DoyleAlaa Elghamry avatar Alaa Elghamryorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoMehmet Tekman avatar Mehmet Tekmanorcid logoDave Clements avatar Dave Clementsorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoFlorian Heyl avatar Florian HeylSebastian Schaaf avatar Sebastian Schaaforcid logoBjörn Grüning avatar Björn Grüningorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoMarius van den Beek avatar Marius van den Beekorcid logoNicola Soranzo avatar Nicola SoranzoDonny Vrins avatar Donny VrinsMirela Minkova avatar Mirela Minkovaorcid logoNate Coraor avatar Nate CoraorCyril Monjeaud avatar Cyril Monjeaudorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonMélanie Pétéra avatar Mélanie Pétéraorcid logoMatthias Bernt avatar Matthias Berntorcid logoMorgan Howells avatar Morgan HowellsAnne Pajon avatar Anne PajonAndrea Bagnacani avatar Andrea Bagnacaniorcid logoMarisa Loach avatar Marisa LoachDilmurat Yusuf avatar Dilmurat Yusuforcid logoBert Droesbeke avatar Bert Droesbekeorcid logoAnna Syme avatar Anna Symeorcid logoBérénice Batut avatar Bérénice Batutorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoNadia Goué avatar Nadia Gouéorcid logoLucille Delisle avatar Lucille DelisleJoachim Wolff avatar Joachim WolffAnton Nekrutenko avatar Anton Nekrutenkoorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoTeresa Müller avatar Teresa Müllerorcid logoHelena Rasche avatar Helena Rascheorcid logoAnthony Bretaudeau avatar Anthony BretaudeauWilliam Durand avatar William Durandorcid logoWendi Bacon avatar Wendi BaconYongbin Li avatar Yongbin Liorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoMelanie Föll avatar Melanie FöllChristopher Barnett avatar Christopher BarnettGildas Le Corguillé avatar Gildas Le Corguilléorcid logoRenato Alves avatar Renato Alvesorcid logoJohn Davis avatar John Davisorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoArmin Dadras avatar Armin DadrasSarah Peter avatar Sarah PeterGareth Price avatar Gareth PriceNiall Beard avatar Niall Beardorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoPhil Reed avatar Phil Reed

Funding

These individuals or organisations provided funding support for the development of this resource