Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy
español
    Video Languages

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
galaxy-intro
Introduction to Digital Humanities in Galaxy
text mining
Introduction to Galaxy as an RDM platform
galaxy-intro fair

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
cyoa galaxy-intro
From peaks to genes
deutsch español italiano
How to reproduce published Galaxy analyses
galaxy-intro
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
fair how-to-cite-galaxy
Introduction to the Dataverse Integration in Galaxy

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

orcid logoWendi Bacon avatar Wendi BaconMarius van den Beek avatar Marius van den Beekorcid logoBjörn Grüning avatar Björn GrüningAndrea Bagnacani avatar Andrea Bagnacaniorcid logoDave Clements avatar Dave Clementsorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoBérénice Batut avatar Bérénice Batutorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoMelanie Föll avatar Melanie Föllorcid logoAnne Fouilloux avatar Anne FouillouxAnton Nekrutenko avatar Anton NekrutenkoChristopher Barnett avatar Christopher BarnettSarah Peter avatar Sarah Peterorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoAnup Kumar avatar Anup Kumarorcid logoPeter van Heusden avatar Peter van HeusdenSebastian Schaaf avatar Sebastian SchaafWilliam Durand avatar William DurandMélanie Petera avatar Mélanie Peteraorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoArmin Dadras avatar Armin DadrasScott Cain avatar Scott Cainorcid logoAnna Syme avatar Anna SymeDilmurat Yusuf avatar Dilmurat Yusuforcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonGildas Le Corguillé avatar Gildas Le CorguilléOlha Nahorna avatar Olha Nahornaorcid logoTristan Reynolds avatar Tristan ReynoldsGareth Price avatar Gareth PriceYongbin Li avatar Yongbin LiJoachim Wolff avatar Joachim WolffAnne Pajon avatar Anne Pajonorcid logoRenato Alves avatar Renato Alvesorcid logoNicola Soranzo avatar Nicola SoranzoDonny Vrins avatar Donny VrinsDavid López avatar David Lópezorcid logoRand Zoabi avatar Rand ZoabiNiall Beard avatar Niall Beardorcid logoLucille Delisle avatar Lucille Delisleorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzAlaa Elghamry avatar Alaa ElghamryGoodnews Sandy avatar Goodnews Sandyorcid logoNate Coraor avatar Nate Coraororcid logoMorgan Howells avatar Morgan Howellsorcid logoMarisa Loach avatar Marisa Loachorcid logoPavankumar Videm avatar Pavankumar VidemCyril Monjeaud avatar Cyril Monjeaudorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoTeresa Müller avatar Teresa Müllerorcid logoMartin Čech avatar Martin ČechMatthias Bernt avatar Matthias Berntorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoHelena Rasche avatar Helena RascheMehmet Tekman avatar Mehmet TekmanMichele Maroni avatar Michele MaroniMirela Minkova avatar Mirela Minkovaorcid logoMaria Doyle avatar Maria Doyleorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoNadia Goué avatar Nadia Gouéorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoPhil Reed avatar Phil Reedorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoClemens Blank avatar Clemens Blankorcid logoFlorian Heyl avatar Florian Heylorcid logoJohn Davis avatar John Davis

Funding

These individuals or organisations provided funding support for the development of this resource

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ErasmusMC
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SURF
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UFR
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Melbourne Bioinformatics
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MWK
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DataPLANT
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The University of Melbourne
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de.KCD
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ELIXIR Europe
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Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
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Australian BioCommons
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PSU
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de.NBI