Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoAnna Syme avatar Anna Symeorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoMelanie Föll avatar Melanie Föllorcid logoAnne Fouilloux avatar Anne FouillouxSarah Peter avatar Sarah Peterorcid logoMarius van den Beek avatar Marius van den BeekMichele Maroni avatar Michele MaroniCyril Monjeaud avatar Cyril Monjeaudorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoBjörn Grüning avatar Björn Grüningorcid logoMatthias Bernt avatar Matthias Berntorcid logoBert Droesbeke avatar Bert DroesbekeWilliam Durand avatar William DurandChristopher Barnett avatar Christopher Barnettorcid logoArmin Dadras avatar Armin Dadrasorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoNicola Soranzo avatar Nicola SoranzoAnne Pajon avatar Anne PajonJoachim Wolff avatar Joachim WolffScott Cain avatar Scott CainDonny Vrins avatar Donny Vrinsorcid logoMorgan Howells avatar Morgan Howellsorcid logoMarisa Loach avatar Marisa Loachorcid logoNate Coraor avatar Nate CoraorAlaa Elghamry avatar Alaa Elghamryorcid logoWendi Bacon avatar Wendi Baconorcid logoTristan Reynolds avatar Tristan ReynoldsGoodnews Sandy avatar Goodnews Sandyorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoLucille Delisle avatar Lucille Delisleorcid logoHelena Rasche avatar Helena Rascheorcid logoFlorian Heyl avatar Florian Heylorcid logoAhmed Hamid Awan avatar Ahmed Hamid AwanMirela Minkova avatar Mirela MinkovaDavid López avatar David LópezSebastian Schaaf avatar Sebastian SchaafAndrea Bagnacani avatar Andrea BagnacaniYongbin Li avatar Yongbin Liorcid logoMaria Doyle avatar Maria Doyleorcid logoPhil Reed avatar Phil Reedorcid logoDeepti Varshney avatar Deepti VarshneyGildas Le Corguillé avatar Gildas Le CorguilléMehmet Tekman avatar Mehmet TekmanNiall Beard avatar Niall Beardorcid logoBérénice Batut avatar Bérénice BatutGareth Price avatar Gareth Priceorcid logoRand Zoabi avatar Rand Zoabiorcid logoAnthony Bretaudeau avatar Anthony BretaudeauDilmurat Yusuf avatar Dilmurat Yusuforcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoTeresa Müller avatar Teresa MüllerAnton Nekrutenko avatar Anton Nekrutenkoorcid logoClemens Blank avatar Clemens Blankorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoRenato Alves avatar Renato Alvesorcid logoDave Clements avatar Dave Clementsorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoJohn Davis avatar John Davisorcid logoMartin Čech avatar Martin Čechorcid logoDaniela Schneider avatar Daniela SchneiderOlha Nahorna avatar Olha Nahornaorcid logoNadia Goué avatar Nadia GouéMélanie Pétéra avatar Mélanie Pétéraorcid logoAnup Kumar avatar Anup Kumarorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoPeter van Heusden avatar Peter van Heusden

Funding

These individuals or organisations provided funding support for the development of this resource