Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy
español
    Video Languages

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
text mining
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
cyoa
From peaks to genes
deutsch español italiano
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
fair how-to-cite-galaxy
Introduction to the Dataverse Integration in Galaxy

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

orcid logoCristóbal Gallardo avatar Cristóbal GallardoGareth Price avatar Gareth Priceorcid logoNate Coraor avatar Nate CoraorSebastian Schaaf avatar Sebastian Schaaforcid logoMartin Čech avatar Martin Čechorcid logoDeepti Varshney avatar Deepti VarshneyJoachim Wolff avatar Joachim WolffMirela Minkova avatar Mirela Minkovaorcid logoHelena Rasche avatar Helena Rascheorcid logoBert Droesbeke avatar Bert DroesbekeMehmet Tekman avatar Mehmet TekmanDilmurat Yusuf avatar Dilmurat Yusuforcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonYongbin Li avatar Yongbin Liorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoMelanie Föll avatar Melanie FöllMichele Maroni avatar Michele MaroniAlaa Elghamry avatar Alaa Elghamryorcid logoNadia Goué avatar Nadia Gouéorcid logoMorgan Howells avatar Morgan Howellsorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzChristopher Barnett avatar Christopher Barnettorcid logoMaria Doyle avatar Maria Doyleorcid logoWendi Bacon avatar Wendi BaconMatthias Bernt avatar Matthias Berntorcid logoBjörn Grüning avatar Björn GrüningDonny Vrins avatar Donny VrinsDavid López avatar David Lópezorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoLucille Delisle avatar Lucille Delisleorcid logoWolfgang Maier avatar Wolfgang MaierAnne Pajon avatar Anne PajonMarius van den Beek avatar Marius van den Beekorcid logoRenato Alves avatar Renato Alvesorcid logoAnup Kumar avatar Anup Kumarorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoAnna Syme avatar Anna SymeWilliam Durand avatar William DurandGoodnews Sandy avatar Goodnews Sandyorcid logoRand Zoabi avatar Rand ZoabiAnton Nekrutenko avatar Anton Nekrutenkoorcid logoPhil Reed avatar Phil Reedorcid logoBérénice Batut avatar Bérénice Batutorcid logoDaniel Blankenberg avatar Daniel BlankenbergCyril Monjeaud avatar Cyril MonjeaudOlha Nahorna avatar Olha Nahornaorcid logoMarisa Loach avatar Marisa Loachorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoDaniela Schneider avatar Daniela SchneiderScott Cain avatar Scott Cainorcid logoArmin Dadras avatar Armin Dadrasorcid logoClemens Blank avatar Clemens BlankNiall Beard avatar Niall Beardorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoNicola Soranzo avatar Nicola SoranzoAndrea Bagnacani avatar Andrea Bagnacaniorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoMélanie Petera avatar Mélanie PeteraGildas Le Corguillé avatar Gildas Le Corguilléorcid logoDave Clements avatar Dave Clementsorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoTeresa Müller avatar Teresa MüllerSarah Peter avatar Sarah Peterorcid logoFlorian Heyl avatar Florian Heylorcid logoJohn Davis avatar John Davisorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awan

Funding

These individuals or organisations provided funding support for the development of this resource

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ErasmusMC
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ELIXIR Europe
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UFR
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PSU
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Melbourne Bioinformatics
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MWK
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Australian BioCommons
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DataPLANT
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The University of Melbourne
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de.NBI
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Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
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SURF
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de.KCD