Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoMartin Čech avatar Martin Čechorcid logoDeepti Varshney avatar Deepti VarshneyAndrea Bagnacani avatar Andrea Bagnacaniorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoJohn Davis avatar John DavisGoodnews Sandy avatar Goodnews SandyGareth Price avatar Gareth Priceorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoAnna Syme avatar Anna Symeorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoTeresa Müller avatar Teresa Müllerorcid logoMelanie Föll avatar Melanie Föllorcid logoPhil Reed avatar Phil Reedorcid logoCristóbal Gallardo avatar Cristóbal GallardoMehmet Tekman avatar Mehmet TekmanAlaa Elghamry avatar Alaa Elghamryorcid logoClemens Blank avatar Clemens Blankorcid logoMatthias Bernt avatar Matthias BerntScott Cain avatar Scott CainJoachim Wolff avatar Joachim WolffDonny Vrins avatar Donny Vrinsorcid logoLucille Delisle avatar Lucille Delisleorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoArmin Dadras avatar Armin Dadrasorcid logoFlorian Heyl avatar Florian Heylorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoRenato Alves avatar Renato AlvesYongbin Li avatar Yongbin LiCyril Monjeaud avatar Cyril Monjeaudorcid logoDave Clements avatar Dave ClementsDavid López avatar David Lópezorcid logoHelena Rasche avatar Helena Rascheorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoMorgan Howells avatar Morgan HowellsDilmurat Yusuf avatar Dilmurat Yusuforcid logoMaria Doyle avatar Maria Doyleorcid logoMarius van den Beek avatar Marius van den BeekGildas Le Corguillé avatar Gildas Le Corguilléorcid logoRand Zoabi avatar Rand ZoabiAnne Pajon avatar Anne Pajonorcid logoBjörn Grüning avatar Björn Grüningorcid logoNate Coraor avatar Nate Coraororcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoSarah Peter avatar Sarah PeterOlha Nahorna avatar Olha NahornaWilliam Durand avatar William Durandorcid logoDaniel Blankenberg avatar Daniel BlankenbergSebastian Schaaf avatar Sebastian Schaaforcid logoWendi Bacon avatar Wendi BaconMichele Maroni avatar Michele Maroniorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoAlex Ostrovsky avatar Alex OstrovskyMélanie Pétéra avatar Mélanie PétéraMirela Minkova avatar Mirela Minkovaorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoNadia Goué avatar Nadia Gouéorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoBérénice Batut avatar Bérénice Batutorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoAnthony Bretaudeau avatar Anthony BretaudeauNiall Beard avatar Niall BeardChristopher Barnett avatar Christopher BarnettAnton Nekrutenko avatar Anton Nekrutenkoorcid logoMarisa Loach avatar Marisa Loachorcid logoAnup Kumar avatar Anup Kumar

Funding

These individuals or organisations provided funding support for the development of this resource