Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

Olha Nahorna avatar Olha Nahornaorcid logoMarisa Loach avatar Marisa LoachMirela Minkova avatar Mirela MinkovaMehmet Tekman avatar Mehmet Tekmanorcid logoMelanie Föll avatar Melanie Föllorcid logoAnup Kumar avatar Anup KumarNiall Beard avatar Niall Beardorcid logoYvan Le Bras avatar Yvan Le BrasScott Cain avatar Scott Cainorcid logoBérénice Batut avatar Bérénice BatutChristopher Barnett avatar Christopher BarnettMichele Maroni avatar Michele MaroniDavid López avatar David Lópezorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoDeepti Varshney avatar Deepti VarshneyJoachim Wolff avatar Joachim Wolfforcid logoPhil Reed avatar Phil ReedSebastian Schaaf avatar Sebastian Schaaforcid logoRand Zoabi avatar Rand Zoabiorcid logoDave Clements avatar Dave ClementsWilliam Durand avatar William DurandGoodnews Sandy avatar Goodnews Sandyorcid logoMorgan Howells avatar Morgan Howellsorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoLucille Delisle avatar Lucille DelisleDilmurat Yusuf avatar Dilmurat Yusuforcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonSarah Peter avatar Sarah PeterGareth Price avatar Gareth Priceorcid logoTeresa Müller avatar Teresa Müllerorcid logoNate Coraor avatar Nate Coraororcid logoWolfgang Maier avatar Wolfgang Maierorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoArmin Dadras avatar Armin Dadrasorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoMaria Doyle avatar Maria Doyleorcid logoAnna Syme avatar Anna SymeYongbin Li avatar Yongbin Liorcid logoFlorian Heyl avatar Florian Heylorcid logoClemens Blank avatar Clemens BlankMélanie Petera avatar Mélanie Peteraorcid logoHelena Rasche avatar Helena RascheCyril Monjeaud avatar Cyril Monjeaudorcid logoMarius van den Beek avatar Marius van den Beekorcid logoJohn Davis avatar John Davisorcid logoWendi Bacon avatar Wendi Baconorcid logoMatthias Bernt avatar Matthias Berntorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoRenato Alves avatar Renato AlvesAlaa Elghamry avatar Alaa Elghamryorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoMartin Čech avatar Martin Čechorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoBjörn Grüning avatar Björn GrüningAndrea Bagnacani avatar Andrea BagnacaniGildas Le Corguillé avatar Gildas Le CorguilléAnton Nekrutenko avatar Anton Nekrutenkoorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzAnne Pajon avatar Anne PajonDonny Vrins avatar Donny Vrinsorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoNadia Goué avatar Nadia Gouéorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solano

Funding

These individuals or organisations provided funding support for the development of this resource