Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

Niall Beard avatar Niall Beardorcid logoLucille Delisle avatar Lucille DelisleSebastian Schaaf avatar Sebastian Schaaforcid logoAnup Kumar avatar Anup KumarAnton Nekrutenko avatar Anton NekrutenkoScott Cain avatar Scott CainChristopher Barnett avatar Christopher Barnettorcid logoMartin Čech avatar Martin Čechorcid logoMarius van den Beek avatar Marius van den BeekMichele Maroni avatar Michele Maroniorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoRenato Alves avatar Renato Alvesorcid logoTeresa Müller avatar Teresa MüllerGareth Price avatar Gareth PriceCyril Monjeaud avatar Cyril Monjeaudorcid logoYvan Le Bras avatar Yvan Le BrasOlha Nahorna avatar Olha Nahornaorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoMarisa Loach avatar Marisa Loachorcid logoAnna Syme avatar Anna SymeWilliam Durand avatar William Durandorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoClemens Blank avatar Clemens Blankorcid logoBjörn Grüning avatar Björn Grüningorcid logoPhil Reed avatar Phil ReedDilmurat Yusuf avatar Dilmurat Yusuforcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoHelena Rasche avatar Helena RascheDonny Vrins avatar Donny VrinsAndrea Bagnacani avatar Andrea Bagnacaniorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoWendi Bacon avatar Wendi Baconorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoNate Coraor avatar Nate CoraorYongbin Li avatar Yongbin Liorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoBérénice Batut avatar Bérénice BatutMirela Minkova avatar Mirela Minkovaorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoArmin Dadras avatar Armin Dadrasorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoMelanie Föll avatar Melanie FöllMélanie Pétéra avatar Mélanie PétéraGoodnews Sandy avatar Goodnews Sandyorcid logoSaskia Hiltemann avatar Saskia HiltemannDavid López avatar David LópezJoachim Wolff avatar Joachim Wolfforcid logoFlorian Heyl avatar Florian HeylMehmet Tekman avatar Mehmet Tekmanorcid logoMorgan Howells avatar Morgan HowellsSarah Peter avatar Sarah Peterorcid logoJohn Davis avatar John DavisAnne Pajon avatar Anne Pajonorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoDave Clements avatar Dave Clementsorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoMaria Doyle avatar Maria Doyleorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoNadia Goué avatar Nadia Gouéorcid logoMatthias Bernt avatar Matthias Berntorcid logoRand Zoabi avatar Rand Zoabiorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoAnne Fouilloux avatar Anne FouillouxAlaa Elghamry avatar Alaa ElghamryGildas Le Corguillé avatar Gildas Le Corguillé

Funding

These individuals or organisations provided funding support for the development of this resource