Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoMarius van den Beek avatar Marius van den Beekorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoMarisa Loach avatar Marisa Loachorcid logoArmin Dadras avatar Armin Dadrasorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoChristopher Barnett avatar Christopher Barnettorcid logoPhil Reed avatar Phil ReedAnton Nekrutenko avatar Anton NekrutenkoDavid López avatar David Lópezorcid logoPavankumar Videm avatar Pavankumar VidemSarah Peter avatar Sarah PeterNiall Beard avatar Niall BeardGoodnews Sandy avatar Goodnews Sandyorcid logoAnup Kumar avatar Anup Kumarorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoMelanie Föll avatar Melanie FöllAnne Pajon avatar Anne Pajonorcid logoBjörn Grüning avatar Björn Grüningorcid logoFlorian Heyl avatar Florian HeylOlha Nahorna avatar Olha Nahornaorcid logoClemens Blank avatar Clemens BlankScott Cain avatar Scott CainAndrea Bagnacani avatar Andrea Bagnacaniorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoHelena Rasche avatar Helena RascheYongbin Li avatar Yongbin LiMirela Minkova avatar Mirela Minkovaorcid logoMatthias Bernt avatar Matthias Berntorcid logoBérénice Batut avatar Bérénice BatutAlaa Elghamry avatar Alaa ElghamryMehmet Tekman avatar Mehmet TekmanSebastian Schaaf avatar Sebastian Schaaforcid logoNicola Soranzo avatar Nicola SoranzoCyril Monjeaud avatar Cyril Monjeaudorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoDave Clements avatar Dave Clementsorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoWendi Bacon avatar Wendi BaconDilmurat Yusuf avatar Dilmurat YusufDonny Vrins avatar Donny Vrinsorcid logoNadia Goué avatar Nadia Gouéorcid logoJohn Davis avatar John Davisorcid logoTeresa Müller avatar Teresa Müllerorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzJoachim Wolff avatar Joachim Wolfforcid logoRand Zoabi avatar Rand Zoabiorcid logoMorgan Howells avatar Morgan Howellsorcid logoMartin Čech avatar Martin Čechorcid logoSaskia Hiltemann avatar Saskia HiltemannMélanie Pétéra avatar Mélanie PétéraWilliam Durand avatar William Durandorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoMaria Doyle avatar Maria DoyleGareth Price avatar Gareth Priceorcid logoLucille Delisle avatar Lucille DelisleMichele Maroni avatar Michele MaroniGildas Le Corguillé avatar Gildas Le Corguilléorcid logoNate Coraor avatar Nate Coraororcid logoWolfgang Maier avatar Wolfgang Maierorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoAnna Syme avatar Anna Symeorcid logoRenato Alves avatar Renato Alvesorcid logoPeter van Heusden avatar Peter van Heusden

Funding

These individuals or organisations provided funding support for the development of this resource