Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoMatthias Bernt avatar Matthias Berntorcid logoAnup Kumar avatar Anup Kumarorcid logoMaria Doyle avatar Maria Doyleorcid logoMelanie Föll avatar Melanie FöllCyril Monjeaud avatar Cyril MonjeaudOlha Nahorna avatar Olha Nahornaorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoCristóbal Gallardo avatar Cristóbal GallardoAndrea Bagnacani avatar Andrea Bagnacaniorcid logoAnna Syme avatar Anna SymeMehmet Tekman avatar Mehmet Tekmanorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoTeresa Müller avatar Teresa Müllerorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoMarisa Loach avatar Marisa LoachChristopher Barnett avatar Christopher BarnettGareth Price avatar Gareth PriceDonny Vrins avatar Donny Vrinsorcid logoWendi Bacon avatar Wendi BaconAnne Pajon avatar Anne Pajonorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoArmin Dadras avatar Armin Dadrasorcid logoMorgan Howells avatar Morgan Howellsorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoNate Coraor avatar Nate Coraororcid logoBjörn Grüning avatar Björn Grüningorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoFlorian Heyl avatar Florian HeylNiall Beard avatar Niall BeardYongbin Li avatar Yongbin LiMirela Minkova avatar Mirela Minkovaorcid logoDaniel Blankenberg avatar Daniel BlankenbergMichele Maroni avatar Michele MaroniSebastian Schaaf avatar Sebastian Schaaforcid logoRand Zoabi avatar Rand ZoabiGoodnews Sandy avatar Goodnews Sandyorcid logoNicola Soranzo avatar Nicola SoranzoScott Cain avatar Scott Cainorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoMartin Čech avatar Martin Čechorcid logoMarius van den Beek avatar Marius van den Beekorcid logoBérénice Batut avatar Bérénice BatutMélanie Pétéra avatar Mélanie Pétéraorcid logoClemens Blank avatar Clemens BlankSarah Peter avatar Sarah Peterorcid logoDeepti Varshney avatar Deepti VarshneyJoachim Wolff avatar Joachim WolffDilmurat Yusuf avatar Dilmurat Yusuforcid logoHelena Rasche avatar Helena RascheGildas Le Corguillé avatar Gildas Le Corguilléorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoPavankumar Videm avatar Pavankumar VidemWilliam Durand avatar William Durandorcid logoRenato Alves avatar Renato Alvesorcid logoNadia Goué avatar Nadia GouéDavid López avatar David LópezAlaa Elghamry avatar Alaa Elghamryorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoPhil Reed avatar Phil ReedAnton Nekrutenko avatar Anton Nekrutenkoorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoJohn Davis avatar John Davisorcid logoLucille Delisle avatar Lucille Delisleorcid logoDave Clements avatar Dave Clements

Funding

These individuals or organisations provided funding support for the development of this resource