Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoMelanie Föll avatar Melanie FöllDavid López avatar David Lópezorcid logoLucille Delisle avatar Lucille Delisleorcid logoDaniel Blankenberg avatar Daniel BlankenbergYongbin Li avatar Yongbin LiScott Cain avatar Scott Cainorcid logoMartin Čech avatar Martin Čechorcid logoBérénice Batut avatar Bérénice Batutorcid logoAnna Syme avatar Anna Symeorcid logoMarius van den Beek avatar Marius van den Beekorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzAlaa Elghamry avatar Alaa Elghamryorcid logoTeresa Müller avatar Teresa Müllerorcid logoSaskia Hiltemann avatar Saskia HiltemannJoachim Wolff avatar Joachim Wolfforcid logoMatthias Bernt avatar Matthias BerntAnton Nekrutenko avatar Anton Nekrutenkoorcid logoNate Coraor avatar Nate CoraorAndrea Bagnacani avatar Andrea Bagnacaniorcid logoRenato Alves avatar Renato AlvesSebastian Schaaf avatar Sebastian SchaafDonny Vrins avatar Donny VrinsMichele Maroni avatar Michele Maroniorcid logoFlorian Heyl avatar Florian HeylGareth Price avatar Gareth Priceorcid logoCristóbal Gallardo avatar Cristóbal GallardoMirela Minkova avatar Mirela Minkovaorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoPavankumar Videm avatar Pavankumar VidemNiall Beard avatar Niall Beardorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoHelena Rasche avatar Helena Rascheorcid logoWendi Bacon avatar Wendi BaconWilliam Durand avatar William Durandorcid logoBjörn Grüning avatar Björn Grüningorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoAnup Kumar avatar Anup KumarOlha Nahorna avatar Olha Nahornaorcid logoMaria Doyle avatar Maria DoyleDilmurat Yusuf avatar Dilmurat YusufGoodnews Sandy avatar Goodnews Sandyorcid logoMorgan Howells avatar Morgan Howellsorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonGildas Le Corguillé avatar Gildas Le Corguilléorcid logoMarisa Loach avatar Marisa Loachorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoPhil Reed avatar Phil ReedSarah Peter avatar Sarah Peterorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoDave Clements avatar Dave ClementsAnne Pajon avatar Anne Pajonorcid logoJohn Davis avatar John DavisCyril Monjeaud avatar Cyril Monjeaudorcid logoNadia Goué avatar Nadia Gouéorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoRand Zoabi avatar Rand Zoabiorcid logoArmin Dadras avatar Armin DadrasMélanie Pétéra avatar Mélanie Pétéraorcid logoAnthony Bretaudeau avatar Anthony BretaudeauMehmet Tekman avatar Mehmet Tekmanorcid logoClemens Blank avatar Clemens BlankChristopher Barnett avatar Christopher Barnettorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solano

Funding

These individuals or organisations provided funding support for the development of this resource