Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

Sarah Peter avatar Sarah Peterorcid logoMarius van den Beek avatar Marius van den Beekorcid logoMarisa Loach avatar Marisa Loachorcid logoBert Droesbeke avatar Bert DroesbekeCyril Monjeaud avatar Cyril Monjeaudorcid logoMartin Čech avatar Martin Čechorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoHelena Rasche avatar Helena Rascheorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoTristan Reynolds avatar Tristan ReynoldsNiall Beard avatar Niall Beardorcid logoMorgan Howells avatar Morgan HowellsAlaa Elghamry avatar Alaa Elghamryorcid logoAnup Kumar avatar Anup KumarAndrea Bagnacani avatar Andrea BagnacaniMehmet Tekman avatar Mehmet Tekmanorcid logoWendi Bacon avatar Wendi Baconorcid logoBjörn Grüning avatar Björn Grüningorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoAnna Syme avatar Anna Symeorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzOlha Nahorna avatar Olha Nahornaorcid logoDave Clements avatar Dave Clementsorcid logoTeresa Müller avatar Teresa Müllerorcid logoMatthias Bernt avatar Matthias Berntorcid logoRenato Alves avatar Renato Alvesorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonMirela Minkova avatar Mirela Minkovaorcid logoMaria Doyle avatar Maria Doyleorcid logoFlorian Heyl avatar Florian Heylorcid logoPhil Reed avatar Phil ReedDavid López avatar David Lópezorcid logoJohn Davis avatar John DavisWilliam Durand avatar William DurandGoodnews Sandy avatar Goodnews Sandyorcid logoClemens Blank avatar Clemens Blankorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoAhmed Hamid Awan avatar Ahmed Hamid AwanAnton Nekrutenko avatar Anton NekrutenkoJoachim Wolff avatar Joachim Wolfforcid logoDeepti Varshney avatar Deepti Varshneyorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoNate Coraor avatar Nate Coraororcid logoBérénice Batut avatar Bérénice BatutDonny Vrins avatar Donny Vrinsorcid logoArmin Dadras avatar Armin Dadrasorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoAnthony Bretaudeau avatar Anthony BretaudeauMichele Maroni avatar Michele MaroniYongbin Li avatar Yongbin LiMélanie Pétéra avatar Mélanie Pétéraorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoRand Zoabi avatar Rand Zoabiorcid logoMelanie Föll avatar Melanie FöllDilmurat Yusuf avatar Dilmurat YusufGildas Le Corguillé avatar Gildas Le Corguilléorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoNicola Soranzo avatar Nicola SoranzoChristopher Barnett avatar Christopher Barnettorcid logoNadia Goué avatar Nadia GouéGareth Price avatar Gareth Priceorcid logoLucille Delisle avatar Lucille DelisleSebastian Schaaf avatar Sebastian SchaafAnne Pajon avatar Anne PajonScott Cain avatar Scott Cain

Funding

These individuals or organisations provided funding support for the development of this resource