Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoMatthias Bernt avatar Matthias Berntorcid logoNate Coraor avatar Nate Coraororcid logoLucille Delisle avatar Lucille Delisleorcid logoBjörn Grüning avatar Björn Grüningorcid logoNicola Soranzo avatar Nicola SoranzoGoodnews Sandy avatar Goodnews Sandyorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoMelanie Föll avatar Melanie FöllAnton Nekrutenko avatar Anton NekrutenkoNiall Beard avatar Niall Beardorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoPavankumar Videm avatar Pavankumar VidemMirela Minkova avatar Mirela MinkovaGareth Price avatar Gareth Priceorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoSaskia Hiltemann avatar Saskia HiltemannWilliam Durand avatar William Durandorcid logoMarisa Loach avatar Marisa LoachYongbin Li avatar Yongbin LiSebastian Schaaf avatar Sebastian Schaaforcid logoHelena Rasche avatar Helena Rascheorcid logoArmin Dadras avatar Armin DadrasJoachim Wolff avatar Joachim WolffMélanie Pétéra avatar Mélanie Pétéraorcid logoPhil Reed avatar Phil ReedGildas Le Corguillé avatar Gildas Le CorguilléCyril Monjeaud avatar Cyril Monjeaudorcid logoRand Zoabi avatar Rand ZoabiOlha Nahorna avatar Olha Nahornaorcid logoAnna Syme avatar Anna Symeorcid logoAnup Kumar avatar Anup Kumarorcid logoClemens Blank avatar Clemens Blankorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoDave Clements avatar Dave ClementsChristopher Barnett avatar Christopher Barnettorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoJohn Davis avatar John Davisorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoRenato Alves avatar Renato Alvesorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoJohn Chilton avatar John Chiltonorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoBérénice Batut avatar Bérénice Batutorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonAnne Pajon avatar Anne Pajonorcid logoMorgan Howells avatar Morgan HowellsAlaa Elghamry avatar Alaa Elghamryorcid logoMartin Čech avatar Martin ČechDonny Vrins avatar Donny VrinsScott Cain avatar Scott Cainorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoTeresa Müller avatar Teresa Müllerorcid logoDeepti Varshney avatar Deepti VarshneySarah Peter avatar Sarah Peterorcid logoFlorian Heyl avatar Florian HeylMehmet Tekman avatar Mehmet TekmanMichele Maroni avatar Michele Maroniorcid logoNadia Goué avatar Nadia Gouéorcid logoMarius van den Beek avatar Marius van den BeekDavid López avatar David LópezDilmurat Yusuf avatar Dilmurat Yusuforcid logoWendi Bacon avatar Wendi BaconAndrea Bagnacani avatar Andrea Bagnacaniorcid logoMaria Doyle avatar Maria Doyle

Funding

These individuals or organisations provided funding support for the development of this resource