Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates rss-feed with our RSS Feed

Community Resources

Community Home Maintainer Home

Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

orcid logoPhil Reed avatar Phil ReedDavid López avatar David Lópezorcid logoSaskia Hiltemann avatar Saskia HiltemannMirela Minkova avatar Mirela Minkovaorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoMarius van den Beek avatar Marius van den Beekorcid logoNate Coraor avatar Nate Coraororcid logoMorgan Howells avatar Morgan HowellsAlaa Elghamry avatar Alaa Elghamryorcid logoMatthias Bernt avatar Matthias Berntorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoPavankumar Videm avatar Pavankumar VidemMehmet Tekman avatar Mehmet Tekmanorcid logoAnna Syme avatar Anna Symeorcid logoFlorian Heyl avatar Florian Heylorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonChristopher Barnett avatar Christopher Barnettorcid logoWendi Bacon avatar Wendi Baconorcid logoNicola Soranzo avatar Nicola SoranzoJoachim Wolff avatar Joachim WolffDilmurat Yusuf avatar Dilmurat Yusuforcid logoAhmed Hamid Awan avatar Ahmed Hamid AwanMichele Maroni avatar Michele Maroniorcid logoDaniel Blankenberg avatar Daniel BlankenbergAndrea Bagnacani avatar Andrea Bagnacaniorcid logoPeter van Heusden avatar Peter van HeusdenMélanie Petera avatar Mélanie PeteraDonny Vrins avatar Donny VrinsCyril Monjeaud avatar Cyril MonjeaudOlha Nahorna avatar Olha Nahornaorcid logoLucille Delisle avatar Lucille Delisleorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoBjörn Grüning avatar Björn GrüningNiall Beard avatar Niall Beardorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoMartin Čech avatar Martin ČechAnne Pajon avatar Anne PajonScott Cain avatar Scott Cainorcid logoArmin Dadras avatar Armin DadrasYongbin Li avatar Yongbin LiGoodnews Sandy avatar Goodnews Sandyorcid logoRand Zoabi avatar Rand ZoabiGareth Price avatar Gareth Priceorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoMelanie Föll avatar Melanie Föllorcid logoRenato Alves avatar Renato Alvesorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoTeresa Müller avatar Teresa MüllerSebastian Schaaf avatar Sebastian SchaafAnton Nekrutenko avatar Anton Nekrutenkoorcid logoNadia Goué avatar Nadia Gouéorcid logoBérénice Batut avatar Bérénice Batutorcid logoClemens Blank avatar Clemens Blankorcid logoJohn Davis avatar John Davisorcid logoAnup Kumar avatar Anup Kumarorcid logoAlex Ostrovsky avatar Alex OstrovskyGildas Le Corguillé avatar Gildas Le Corguilléorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoMarisa Loach avatar Marisa Loachorcid logoDave Clements avatar Dave ClementsSarah Peter avatar Sarah Peterorcid logoHelena Rasche avatar Helena Rascheorcid logoMaria Doyle avatar Maria DoyleWilliam Durand avatar William Durandorcid logoCristóbal Gallardo avatar Cristóbal Gallardo

Funding

These individuals or organisations provided funding support for the development of this resource