Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoCristóbal Gallardo avatar Cristóbal GallardoAlaa Elghamry avatar Alaa Elghamryorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoMirela Minkova avatar Mirela Minkovaorcid logoDave Clements avatar Dave Clementsorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoNadia Goué avatar Nadia GouéNiall Beard avatar Niall Beardorcid logoAnne Fouilloux avatar Anne FouillouxAnton Nekrutenko avatar Anton Nekrutenkoorcid logoAnna Syme avatar Anna SymeChristopher Barnett avatar Christopher Barnettorcid logoWendi Bacon avatar Wendi Baconorcid logoMatthias Bernt avatar Matthias BerntWilliam Durand avatar William Durandorcid logoLucille Delisle avatar Lucille DelisleSarah Peter avatar Sarah Peterorcid logoMaria Doyle avatar Maria Doyleorcid logoBjörn Grüning avatar Björn GrüningGoodnews Sandy avatar Goodnews Sandyorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoJohn Davis avatar John DavisCyril Monjeaud avatar Cyril Monjeaudorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoBérénice Batut avatar Bérénice Batutorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoMartin Čech avatar Martin Čechorcid logoArmin Dadras avatar Armin DadrasAnne Pajon avatar Anne Pajonorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoNate Coraor avatar Nate Coraororcid logoRand Zoabi avatar Rand ZoabiSebastian Schaaf avatar Sebastian SchaafJoachim Wolff avatar Joachim Wolfforcid logoMarisa Loach avatar Marisa Loachorcid logoWolfgang Maier avatar Wolfgang MaierScott Cain avatar Scott Cainorcid logoHelena Rasche avatar Helena Rascheorcid logoClemens Blank avatar Clemens Blankorcid logoPhil Reed avatar Phil Reedorcid logoMelanie Föll avatar Melanie FöllMélanie Pétéra avatar Mélanie PétéraGildas Le Corguillé avatar Gildas Le Corguilléorcid logoBert Droesbeke avatar Bert DroesbekeGareth Price avatar Gareth Priceorcid logoAnup Kumar avatar Anup KumarDonny Vrins avatar Donny VrinsDilmurat Yusuf avatar Dilmurat YusufDavid López avatar David LópezMehmet Tekman avatar Mehmet Tekmanorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoTeresa Müller avatar Teresa Müllerorcid logoAnthony Bretaudeau avatar Anthony BretaudeauMichele Maroni avatar Michele MaroniYongbin Li avatar Yongbin LiOlha Nahorna avatar Olha Nahornaorcid logoMarius van den Beek avatar Marius van den Beekorcid logoFlorian Heyl avatar Florian Heylorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoMorgan Howells avatar Morgan Howellsorcid logoYvan Le Bras avatar Yvan Le BrasAndrea Bagnacani avatar Andrea Bagnacaniorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoRenato Alves avatar Renato Alves

Funding

These individuals or organisations provided funding support for the development of this resource