Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoMorgan Howells avatar Morgan HowellsMirela Minkova avatar Mirela Minkovaorcid logoTristan Reynolds avatar Tristan ReynoldsDonny Vrins avatar Donny Vrinsorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoPhil Reed avatar Phil Reedorcid logoHelena Rasche avatar Helena RascheYongbin Li avatar Yongbin Liorcid logoMelanie Föll avatar Melanie FöllChristopher Barnett avatar Christopher Barnettorcid logoMartin Čech avatar Martin ČechAnne Pajon avatar Anne Pajonorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoAnna Syme avatar Anna SymeCyril Monjeaud avatar Cyril Monjeaudorcid logoPavankumar Videm avatar Pavankumar VidemScott Cain avatar Scott Cainorcid logoMarius van den Beek avatar Marius van den BeekMichele Maroni avatar Michele Maroniorcid logoAnup Kumar avatar Anup Kumarorcid logoWendi Bacon avatar Wendi BaconDilmurat Yusuf avatar Dilmurat Yusuforcid logoBjörn Grüning avatar Björn Grüningorcid logoTeresa Müller avatar Teresa MüllerSarah Peter avatar Sarah Peterorcid logoDave Clements avatar Dave ClementsGoodnews Sandy avatar Goodnews SandyGareth Price avatar Gareth PriceAnton Nekrutenko avatar Anton Nekrutenkoorcid logoRand Zoabi avatar Rand Zoabiorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoFlorian Heyl avatar Florian Heylorcid logoMarisa Loach avatar Marisa Loachorcid logoRenato Alves avatar Renato AlvesJoachim Wolff avatar Joachim WolffMélanie Pétéra avatar Mélanie Pétéraorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoAnthony Bretaudeau avatar Anthony BretaudeauWilliam Durand avatar William Durandorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonAndrea Bagnacani avatar Andrea Bagnacaniorcid logoLucille Delisle avatar Lucille Delisleorcid logoMaria Doyle avatar Maria Doyleorcid logoNadia Goué avatar Nadia Gouéorcid logoJohn Davis avatar John DavisAlaa Elghamry avatar Alaa Elghamryorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoNate Coraor avatar Nate Coraororcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoNiall Beard avatar Niall Beardorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoBérénice Batut avatar Bérénice BatutOlha Nahorna avatar Olha Nahornaorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoCristóbal Gallardo avatar Cristóbal GallardoDavid López avatar David Lópezorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoClemens Blank avatar Clemens Blankorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoArmin Dadras avatar Armin Dadrasorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoMatthias Bernt avatar Matthias BerntMehmet Tekman avatar Mehmet TekmanGildas Le Corguillé avatar Gildas Le CorguilléSebastian Schaaf avatar Sebastian Schaaf

Funding

These individuals or organisations provided funding support for the development of this resource