Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

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First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoPavankumar Videm avatar Pavankumar Videmorcid logoMarius van den Beek avatar Marius van den Beekorcid logoSaskia Hiltemann avatar Saskia HiltemannMehmet Tekman avatar Mehmet Tekmanorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoMartin Čech avatar Martin Čechorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoBjörn Grüning avatar Björn GrüningNiall Beard avatar Niall BeardDonny Vrins avatar Donny VrinsYongbin Li avatar Yongbin Liorcid logoMatthias Bernt avatar Matthias BerntScott Cain avatar Scott Cainorcid logoMarisa Loach avatar Marisa LoachMichele Maroni avatar Michele Maroniorcid logoDave Clements avatar Dave Clementsorcid logoAnup Kumar avatar Anup Kumarorcid logoMaria Doyle avatar Maria Doyleorcid logoArmin Dadras avatar Armin Dadrasorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoNadia Goué avatar Nadia Gouéorcid logoNate Coraor avatar Nate Coraororcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoLucille Delisle avatar Lucille DelisleAlaa Elghamry avatar Alaa ElghamryGoodnews Sandy avatar Goodnews SandyCyril Monjeaud avatar Cyril Monjeaudorcid logoJohn Chilton avatar John Chiltonorcid logoWendi Bacon avatar Wendi Baconorcid logoRenato Alves avatar Renato Alvesorcid logoMelanie Föll avatar Melanie Föllorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoClemens Blank avatar Clemens BlankDilmurat Yusuf avatar Dilmurat Yusuforcid logoAnne Fouilloux avatar Anne FouillouxJoachim Wolff avatar Joachim WolffDavid López avatar David Lópezorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonAnne Pajon avatar Anne PajonMélanie Pétéra avatar Mélanie Pétéraorcid logoFlorian Heyl avatar Florian Heylorcid logoRand Zoabi avatar Rand ZoabiSarah Peter avatar Sarah PeterChristopher Barnett avatar Christopher BarnettAnton Nekrutenko avatar Anton Nekrutenkoorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoTeresa Müller avatar Teresa Müllerorcid logoJohn Davis avatar John DavisMirela Minkova avatar Mirela Minkovaorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoAnna Syme avatar Anna Symeorcid logoBérénice Batut avatar Bérénice Batutorcid logoNicola Soranzo avatar Nicola SoranzoGildas Le Corguillé avatar Gildas Le CorguilléAndrea Bagnacani avatar Andrea Bagnacaniorcid logoHelena Rasche avatar Helena Rascheorcid logoBert Droesbeke avatar Bert DroesbekeGareth Price avatar Gareth PriceOlha Nahorna avatar Olha Nahornaorcid logoMorgan Howells avatar Morgan HowellsWilliam Durand avatar William Durandorcid logoPhil Reed avatar Phil ReedSebastian Schaaf avatar Sebastian Schaaf

Funding

These individuals or organisations provided funding support for the development of this resource