Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoAhmed Hamid Awan avatar Ahmed Hamid AwanOlha Nahorna avatar Olha Nahornaorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoClemens Blank avatar Clemens BlankJoachim Wolff avatar Joachim Wolfforcid logoAnna Syme avatar Anna Symeorcid logoRenato Alves avatar Renato Alvesorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoNiall Beard avatar Niall Beardorcid logoMaria Doyle avatar Maria Doyleorcid logoMatthias Bernt avatar Matthias Berntorcid logoMarius van den Beek avatar Marius van den BeekAndrea Bagnacani avatar Andrea Bagnacaniorcid logoMarisa Loach avatar Marisa Loachorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoTeresa Müller avatar Teresa MüllerAlaa Elghamry avatar Alaa Elghamryorcid logoWendi Bacon avatar Wendi BaconChristopher Barnett avatar Christopher BarnettDilmurat Yusuf avatar Dilmurat Yusuforcid logoPeter van Heusden avatar Peter van Heusdenorcid logoBérénice Batut avatar Bérénice Batutorcid logoMartin Čech avatar Martin ČechGildas Le Corguillé avatar Gildas Le Corguilléorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoMelanie Föll avatar Melanie Föllorcid logoNate Coraor avatar Nate CoraorMichele Maroni avatar Michele MaroniGoodnews Sandy avatar Goodnews Sandyorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoNadia Goué avatar Nadia Gouéorcid logoArmin Dadras avatar Armin Dadrasorcid logoAnthony Bretaudeau avatar Anthony BretaudeauMélanie Pétéra avatar Mélanie Pétéraorcid logoBjörn Grüning avatar Björn Grüningorcid logoYvan Le Bras avatar Yvan Le BrasAnton Nekrutenko avatar Anton Nekrutenkoorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoDave Clements avatar Dave ClementsDavid López avatar David Lópezorcid logoHelena Rasche avatar Helena Rascheorcid logoJohn Davis avatar John DavisScott Cain avatar Scott Cainorcid logoCristóbal Gallardo avatar Cristóbal GallardoMirela Minkova avatar Mirela MinkovaGareth Price avatar Gareth PriceSebastian Schaaf avatar Sebastian Schaaforcid logoAnne Fouilloux avatar Anne FouillouxCyril Monjeaud avatar Cyril MonjeaudDonny Vrins avatar Donny VrinsMehmet Tekman avatar Mehmet TekmanAnne Pajon avatar Anne Pajonorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoLucille Delisle avatar Lucille Delisleorcid logoWolfgang Maier avatar Wolfgang MaierWilliam Durand avatar William Durandorcid logoAnup Kumar avatar Anup Kumarorcid logoPhil Reed avatar Phil Reedorcid logoRand Zoabi avatar Rand Zoabiorcid logoMorgan Howells avatar Morgan HowellsYongbin Li avatar Yongbin Liorcid logoFlorian Heyl avatar Florian HeylSarah Peter avatar Sarah Peter

Funding

These individuals or organisations provided funding support for the development of this resource