Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoClemens Blank avatar Clemens Blankorcid logoPhil Reed avatar Phil Reedorcid logoLucille Delisle avatar Lucille Delisleorcid logoMatthias Bernt avatar Matthias Berntorcid logoAnne Fouilloux avatar Anne FouillouxChristopher Barnett avatar Christopher Barnettorcid logoArmin Dadras avatar Armin Dadrasorcid logoMarisa Loach avatar Marisa Loachorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoBert Droesbeke avatar Bert DroesbekeGareth Price avatar Gareth Priceorcid logoBjörn Grüning avatar Björn GrüningMirela Minkova avatar Mirela MinkovaOlha Nahorna avatar Olha NahornaWilliam Durand avatar William Durandorcid logoPeter van Heusden avatar Peter van HeusdenNiall Beard avatar Niall Beardorcid logoNate Coraor avatar Nate Coraororcid logoCristóbal Gallardo avatar Cristóbal GallardoGildas Le Corguillé avatar Gildas Le Corguilléorcid logoMorgan Howells avatar Morgan Howellsorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoMarius van den Beek avatar Marius van den Beekorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoMaria Doyle avatar Maria Doyleorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoHelena Rasche avatar Helena Rascheorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoJohn Davis avatar John DavisAnton Nekrutenko avatar Anton Nekrutenkoorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoBérénice Batut avatar Bérénice BatutAlaa Elghamry avatar Alaa ElghamryAnne Pajon avatar Anne PajonMehmet Tekman avatar Mehmet Tekmanorcid logoDave Clements avatar Dave ClementsMélanie Pétéra avatar Mélanie Pétéraorcid logoWendi Bacon avatar Wendi BaconMichele Maroni avatar Michele MaroniDonny Vrins avatar Donny VrinsDavid López avatar David Lópezorcid logoAnthony Bretaudeau avatar Anthony BretaudeauYongbin Li avatar Yongbin LiGoodnews Sandy avatar Goodnews Sandyorcid logoMelanie Föll avatar Melanie FöllJoachim Wolff avatar Joachim Wolfforcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoRenato Alves avatar Renato AlvesCyril Monjeaud avatar Cyril Monjeaudorcid logoFlorian Heyl avatar Florian Heylorcid logoTeresa Müller avatar Teresa Müllerorcid logoMartin Čech avatar Martin ČechScott Cain avatar Scott Cainorcid logoNadia Goué avatar Nadia Gouéorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoAnup Kumar avatar Anup KumarAndrea Bagnacani avatar Andrea BagnacaniSarah Peter avatar Sarah PeterDilmurat Yusuf avatar Dilmurat Yusuforcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoAnna Syme avatar Anna SymeSebastian Schaaf avatar Sebastian Schaaforcid logoRand Zoabi avatar Rand Zoabiorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotz

Funding

These individuals or organisations provided funding support for the development of this resource