Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoPhil Reed avatar Phil Reedorcid logoNadia Goué avatar Nadia GouéDonny Vrins avatar Donny VrinsDavid López avatar David Lópezorcid logoWendi Bacon avatar Wendi Baconorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzNiall Beard avatar Niall BeardSarah Peter avatar Sarah Peterorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoArmin Dadras avatar Armin DadrasOlha Nahorna avatar Olha Nahornaorcid logoLucille Delisle avatar Lucille Delisleorcid logoMelanie Föll avatar Melanie FöllYongbin Li avatar Yongbin Liorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoDave Clements avatar Dave Clementsorcid logoMaria Doyle avatar Maria Doyleorcid logoBert Droesbeke avatar Bert DroesbekeAndrea Bagnacani avatar Andrea BagnacaniJoachim Wolff avatar Joachim Wolfforcid logoDeepti Varshney avatar Deepti VarshneyAnne Pajon avatar Anne PajonScott Cain avatar Scott Cainorcid logoAnup Kumar avatar Anup Kumarorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoBjörn Grüning avatar Björn Grüningorcid logoRand Zoabi avatar Rand ZoabiAnton Nekrutenko avatar Anton Nekrutenkoorcid logoAnna Syme avatar Anna SymeAlaa Elghamry avatar Alaa ElghamryMehmet Tekman avatar Mehmet TekmanGareth Price avatar Gareth Priceorcid logoSaskia Hiltemann avatar Saskia HiltemannGoodnews Sandy avatar Goodnews Sandyorcid logoTristan Reynolds avatar Tristan ReynoldsDilmurat Yusuf avatar Dilmurat Yusuforcid logoClemens Blank avatar Clemens BlankMichele Maroni avatar Michele Maroniorcid logoMorgan Howells avatar Morgan HowellsGildas Le Corguillé avatar Gildas Le Corguilléorcid logoFlorian Heyl avatar Florian Heylorcid logoNate Coraor avatar Nate CoraorChristopher Barnett avatar Christopher BarnettMirela Minkova avatar Mirela MinkovaSebastian Schaaf avatar Sebastian Schaaforcid logoJohn Davis avatar John Davisorcid logoHelena Rasche avatar Helena Rascheorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoTeresa Müller avatar Teresa MüllerCyril Monjeaud avatar Cyril Monjeaudorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoMarius van den Beek avatar Marius van den Beekorcid logoPavankumar Videm avatar Pavankumar VidemWilliam Durand avatar William DurandMélanie Petera avatar Mélanie Peteraorcid logoBérénice Batut avatar Bérénice Batutorcid logoMatthias Bernt avatar Matthias Berntorcid logoMartin Čech avatar Martin Čechorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoMarisa Loach avatar Marisa Loachorcid logoRenato Alves avatar Renato Alves

Funding

These individuals or organisations provided funding support for the development of this resource