Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoMarius van den Beek avatar Marius van den Beekorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoFlorian Heyl avatar Florian Heylorcid logoMartin Čech avatar Martin Čechorcid logoMorgan Howells avatar Morgan Howellsorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoBjörn Grüning avatar Björn Grüningorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoWendi Bacon avatar Wendi Baconorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzDavid López avatar David Lópezorcid logoAlex Ostrovsky avatar Alex OstrovskyWilliam Durand avatar William Durandorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoAnne Fouilloux avatar Anne FouillouxGareth Price avatar Gareth Priceorcid logoBérénice Batut avatar Bérénice BatutSebastian Schaaf avatar Sebastian SchaafMirela Minkova avatar Mirela MinkovaMehmet Tekman avatar Mehmet TekmanOlha Nahorna avatar Olha NahornaMichele Maroni avatar Michele Maroniorcid logoHelena Rasche avatar Helena Rascheorcid logoRand Zoabi avatar Rand ZoabiSarah Peter avatar Sarah PeterAndrea Bagnacani avatar Andrea Bagnacaniorcid logoLucille Delisle avatar Lucille Delisleorcid logoNadia Goué avatar Nadia GouéDilmurat Yusuf avatar Dilmurat Yusuforcid logoRenato Alves avatar Renato Alvesorcid logoBert Droesbeke avatar Bert DroesbekeAnton Nekrutenko avatar Anton NekrutenkoScott Cain avatar Scott CainDonny Vrins avatar Donny VrinsMélanie Pétéra avatar Mélanie Pétéraorcid logoMaria Doyle avatar Maria Doyleorcid logoDaniela Schneider avatar Daniela SchneiderNiall Beard avatar Niall Beardorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoNicola Soranzo avatar Nicola SoranzoJoachim Wolff avatar Joachim Wolfforcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoNate Coraor avatar Nate Coraororcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoAnup Kumar avatar Anup Kumarorcid logoMarisa Loach avatar Marisa LoachAnne Pajon avatar Anne PajonAlaa Elghamry avatar Alaa Elghamryorcid logoTeresa Müller avatar Teresa MüllerGoodnews Sandy avatar Goodnews Sandyorcid logoPhil Reed avatar Phil Reedorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoArmin Dadras avatar Armin Dadrasorcid logoMatthias Bernt avatar Matthias BerntYongbin Li avatar Yongbin LiGildas Le Corguillé avatar Gildas Le Corguilléorcid logoAnna Syme avatar Anna Symeorcid logoClemens Blank avatar Clemens Blankorcid logoJohn Davis avatar John Davisorcid logoMelanie Föll avatar Melanie Föllorcid logoDave Clements avatar Dave Clementsorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoPavankumar Videm avatar Pavankumar VidemChristopher Barnett avatar Christopher Barnettorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonCyril Monjeaud avatar Cyril Monjeaud

Funding

These individuals or organisations provided funding support for the development of this resource