Clemens Blank

Former Affiliations

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

17 Tutorials

• Proteomics / Secretome Prediction 🧐
• Proteomics / Peptide and Protein ID using OpenMS tools 🧐
• Proteomics / Peptide and Protein ID using SearchGUI and PeptideShaker 🧐
• Proteomics / Detection and quantitation of N-termini (degradomics) via N-TAILS 🧐
• Proteomics / Metaproteomics tutorial ✍️
• Development in Galaxy / Galaxy Webhooks ✍️
• Introduction to Galaxy Analyses / Galaxy Basics for genomics ✍️
• Introduction to Galaxy Analyses / From peaks to genes ✍️ 🧐
• Transcriptomics / Reference-based RNA-Seq data analysis ✍️ 🧐
• Introduction to Galaxy Analyses / Von Peaks zu Genen ✍️
• Transcriptomics / Referenzbasierte RNA-Seq-Datenanalyse ✍️
• Introduction to Galaxy Analyses / De picos a genes ✍️
• Transcriptomics / Análisis de datos RNA-Seq basados en referencias ✍️
• Introduction to Galaxy Analyses / Dai picchi ai geni ✍️
• Transcriptomics / Analisi dei dati RNA-Seq basata su riferimenti ✍️

1 Slide

• Development in Galaxy / Galaxy Webhooks ✍️

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GitHub Activity

github Issues Reported

20 Merged Pull Requests

See all of the github Pull Requests and github Commits by Clemens Blank.

• metaproteomics tutorial - fix a link
• Metaproteomics update
• Fix typo.
• Add functional analysis to metaproteomics tutorial
• Fix typo

Reviewed 6 PRs

We love our community reviewing each other's work!

• tour for protein id with oms
• New tutorial "Protein ID using OpenMS" and major revision of "Protein ID using SG/PS"
  proteomics
• Updated Proteomics metadata.yml
  proteomics
• Add BED file format explanation.
• Change the license to CC BY 4.0
  improvement
  review-needed

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