Melbourne Bioinformatics

Members

These GTN contributors have noted that they are affiliated in some way with this organisation. This list is non-exhaustive, and randomly ordered.

Former Members

These individuals have noted that they previously were affiliated in some way with this organisation. This list is non-exhaustive.

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Tutorials

• Galaxy Server administration / Galaxy Installation with Ansible 💵
• Galaxy Server administration / Upgrading Galaxy 💵
• Galaxy Server administration / Reference Data with CVMFS 💵
• Galaxy Server administration / Galaxy Interactive Tools 💵
• Galaxy Server administration / Galaxy Monitoring with Reports 💵
• Galaxy Server administration / Running Jobs on Remote Resources with Pulsar 💵
• Galaxy Server administration / Reference Data with Data Managers 💵
• Galaxy Server administration / Reference Data with CVMFS without Ansible 💵
• Assembly / Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data) 💵
• Assembly / Large genome assembly and polishing 💵
• Assembly / Hybrid genome assembly - Nanopore and Illumina 💵
• Assembly / An Introduction to Genome Assembly 💵
• Assembly / Chloroplast genome assembly 💵
• Assembly / Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data 💵
• Assembly / De Bruijn Graph Assembly 💵
• Assembly / Unicycler Assembly 💵
• Assembly / Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step 💵
• Genome Annotation / Identification of AMR genes in an assembled bacterial genome 💵
• Genome Annotation / Genome annotation with Prokka 💵
• Using Galaxy and Managing your Data / Downloading and Deleting Data in Galaxy 💵
• Ecology / Checking expected species and contamination in bacterial isolate 💵
• Microbiome / Taxonomic Profiling and Visualization of Metagenomic Data 💵
• Microbiome / 16S Microbial Analysis with mothur (short) 💵
• Microbiome / 16S Microbial Analysis with mothur (extended) 💵
• Variant Analysis / M. tuberculosis Variant Analysis 💵
• Variant Analysis / Microbial Variant Calling 💵
• Epigenetics / ATAC-Seq data analysis 💵
• Epigenetics / Hi-C analysis of Drosophila melanogaster cells using HiCExplorer 💵
• Epigenetics / Formation of the Super-Structures on the Inactive X 💵
• Introduction to Galaxy Analyses / A short introduction to Galaxy 💵
• Introduction to Galaxy Analyses / Best Practices for Citing Galaxy 💵
• FAIR Data, Workflows, and Research / Uploading Data to Zenodo from Galaxy 💵
• FAIR Data, Workflows, and Research / Integrating InvenioRDM-compatible Repositories with Galaxy 💵
• Sequence analysis / Mapping 💵
• Sequence analysis / Quality and contamination control in bacterial isolate using Illumina MiSeq Data 💵
• Introduction to Galaxy Analyses / Breve introducción a Galaxy - en español 💵

GitHub Activity

github Issues Reported

External Links

Website: https://mdhs.unimelb.edu.au/melbournebioinformatics

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