Development in Galaxy
Galaxy is an open-source project. Everyone can contribute to its development with core Galaxy development, integration of softwares in Galaxy environment, …
For any question or discussions related to this topic, or to connect with others in the community, please visit the community chat:
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Core
These are the core, foundational topics for Galaxy development.
| Lesson | Slides | Hands-on | Recordings |
|---|---|---|---|
|
Contributing a New Feature to Galaxy Core
|
|||
|
Debugging Galaxy
|
|||
|
Galaxy Code Architecture
|
|||
|
Writing Automated Tests for Galaxy
|
API
Interacting with the Galaxy API
| Lesson | Slides | Hands-on | Recordings |
|---|---|---|---|
|
Contributing to BioBlend as a developer
|
|||
|
Scripting Galaxy using the API and BioBlend
|
Dependencies
These topics include information on how dependencies work in Galaxy and how to construct them.
| Lesson | Slides | Hands-on | Recordings |
|---|---|---|---|
|
Prerequisites for building software/conda packages
|
|||
|
Tool Dependencies and Conda
|
|||
|
Tool Dependencies and Containers
|
Tool Development
Here you can learn everything about tool development in the Galaxy Ecosystem
Viz
Visualizations in Galaxy give you the ability to implement Javascript apps into Galaxy to analyse and visualise data.
| Lesson | Slides | Hands-on | Recordings |
|---|---|---|---|
|
Generic plugins
|
|||
|
JavaScript plugins
|
Advanced Features
These are more advanced features of Galaxy which you might want to develop for as they greatly expand the abilities of Galaxy.
| Lesson | Slides | Hands-on | Recordings |
|---|---|---|---|
|
Data source integration
|
|||
|
Galaxy Interactive Tours
|
|||
|
Galaxy Webhooks
|
|||
| Setting up a dev Onedata instance |
Frequently Asked Questions
Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.
Follow topic updates rss-feed with our RSS Feed
Community Resources
Community Home Maintainer HomeEditorial Board
This material is reviewed by our Editorial Board:
Gildas Le Corguillé
Bérénice Batut
Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!
Contributors
This material was contributed to by:
Martin Čech
Alex Ostrovsky
Estelle Ancelet
Marie Josse
Clemens Blank
Stéphanie Legras
Erik Schill
John Chilton
Assunta DeSanto
Saskia Hiltemann
Helena Rasche
Ross Lazarus
Dave B.
Cristóbal Gallardo
Loraine Guéguen
Armin Dadras
Anthony Bretaudeau
Yvan Le Bras
Björn Grüning
Łukasz Opioła
Johan Gustafsson
Nicola Soranzo
Nate Coraor
Gildas Le Corguillé
Bérénice Batut
William Durand
Nitesh Turaga
Cyril Monjeaud
Niall Beard
Hervé Ménager
Gianmauro Cuccuru
Aysam Guerler
Wendi Bacon
Dannon Baker
Simon Bray
Youri Hoogstrate
Lain Pavot
Clare Sloggett
Paul Zierep
Cameron Hyde
John Davis
Matthias Bernt
Funding
These individuals or organisations provided funding support for the development of this resource
