Galaxy Training Academy 2025

Asynchronous, Virtual course

The Galaxy Training Academy is a self-paced online training event for beginners and advanced learners who want to improve their Galaxy data analysis skills. Over the course of one week, we offer a diverse selection of learning track for you.

Welcome to the Galaxy Training Academy 2025

Do you want to learn how to use Galaxy, an open source data analysis platform? Then you are at the right place. We offer here a 5-day Global Online and Asynchronous learning event.

Registrations will open on the 3rd of March.

Do you want to join the GTA as a trainer?

Please fill out our form to indicate in what capacity you would like to help.

Do you want to participate as a learner?

In the following, you will learn everything you need to know about the event.

Course format

The event is asynchronous which means you can set your own pace on your learning journey using our provided self-learning materials. You will start the event by yourself at your preferred time. Don’t worry, asynchronous does not mean that you are alone! If you ever need help, you can contact one of our many trainers worldwide via Slack chat.

How to participate

First, you will need to register. We will open registrations on the 3rd of March. You only need a browser and an account on one of the Galaxy instances registered for this event. Please have a look at the setup page.

Content of the event

We provide you with training materials which you can study at your own pace and on your own time throughout the week. Have a look at our program. The program is still under development.

On the first day, you can make yourself familiar with the Galaxy platform. In the next days, you can follow different tracks. Please go to the program tab for more information. On Friday we offer a Fair training program to you.

How to get help

You will not be alone! If you ever need help, you can contact one of our many trainers worldwide via Slack chat. Next to the program, you will find Slack channels you can join to exchange with the trainers and other participants during the event. Here you will also find help if you have questions or run into an issue during the training. We try to cover all time zones with helpers for each topic, but please be patient if you do not get an immediate response.

Certificates

You will be able to obtain a certificate by the end of the event. More information is coming soon.

Who is this course for?

Everyone who would like to get to know Galaxy and learn bioinformatics data analysis, whether you want to master a specific analysis or learn a new skill.

Organisers & Instructors

This event is brought to you by:

Organisers(s) orcid logoDelphine Lariviere avatar Delphine LariviereTeresa Müller avatar Teresa MüllerScott Cain avatar Scott CainNatalie Whitaker-Allen avatar Natalie Whitaker-Allenorcid logoAnna Syme avatar Anna Symeorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoDiana Chiang Jurado avatar Diana Chiang Juradoorcid logoArmin Dadras avatar Armin Dadras
Instructor(s) orcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoAnika Erxleben avatar Anika Erxlebenorcid logoAnna Syme avatar Anna SymeAnup Kumar avatar Anup Kumarorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoBérénice Batut avatar Bérénice Batutorcid logoBjörn Grüning avatar Björn Grüningorcid logoClea Siguret avatar Clea SiguretDannon Baker avatar Dannon Bakerorcid logoDiana Chiang Jurado avatar Diana Chiang JuradoDeepti Varshney avatar Deepti Varshneyorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoEli Chadwick avatar Eli Chadwickorcid logoEngy Nasr avatar Engy NasrEmmanuel Augustine avatar Emmanuel AugustineGareth Price avatar Gareth PriceIgor Makunin avatar Igor Makuninorcid logoJohn Davis avatar John Davisorcid logoLucille Delisle avatar Lucille DelisleMatthias Bernt avatar Matthias Berntorcid logoMelanie Föll avatar Melanie FöllMeltem Kutnu avatar Meltem KutnuMichael Schatz avatar Michael SchatzNatalie Whitaker-Allen avatar Natalie Whitaker-Allenorcid logoNate Coraor avatar Nate Coraororcid logoPaul Zierep avatar Paul Ziereporcid logoPavankumar Videm avatar Pavankumar Videmorcid logoPolina Polunina avatar Polina Poluninaorcid logoPratik Jagtap avatar Pratik Jagtaporcid logoRand Zoabi avatar Rand Zoabiorcid logoRomane LIBOUBAN avatar Romane LIBOUBANorcid logoSaim Momin avatar Saim Mominorcid logoStéphanie Robin avatar Stéphanie Robinorcid logoSubina Mehta avatar Subina MehtaTeresa Müller avatar Teresa Müllerorcid logoTimothy J. Griffin avatar Timothy J. GriffinTyler Collins avatar Tyler Collinsorcid logoWendi Bacon avatar Wendi Baconorcid logoWolfgang Maier avatar Wolfgang Maier

Before you start

Before starting the course, make sure to follow the setup instructions

Monday: Introduction

You will start the week on your local time by watching videos and/or following the text-based tutorials in the program below. There are no live sessions, so you can determine your schedule. A large team of instructors is available on Slack to answer your questions 24/7! Enjoy!

Galaxy introduction

Kick off the week with a hands-on introduction to Galaxy, covering everything from basic navigation and data manipulation to reproducing published analyses, quality control, and mapping sequences to a reference genome. Whether you’re new to Galaxy or looking to strengthen your skills, today’s sessions will equip you with the foundational knowledge needed for more advanced topics.

Start to get to know Galaxy

Lesson Slides Hands-on Recordings
Galaxy Basics for genomics
Understanding Galaxy history system
Using dataset collections
Data Manipulation Olympics
NGS data logistics

Quick start or fresh up your Galaxy knowledge

Lesson Slides Hands-on Recordings
A short introduction to Galaxy

Fundamentals of Sequences analysis

Lesson Slides Hands-on Recordings
Quality Control
Mapping

Tuesday to Thursday: Pick a track

Over the course of these three days, you can choose your preferred track and learn how to use Galaxy for data analysis in this research field. If you find multiple topics interesting, feel free to explore more than one track. Each track will guide you through the process, from basic to more advanced analyses, to accommodate learners of all levels.

Proteomics Transcriptomics Single Cell Microbiome Machine Learning

Friday: Grab bag

Can’t get enough? Then please pick one of our FAIR tutorials below or any of the tutorials within one of the tracks. The trainers present on Slack will do their best to help you if you have a problem and answer questions, but they may not be experts in the topic you selected. You can directly start with your preferred tutorial.

Fair training

Lesson Slides Hands-on Recordings

An overview of the RO-Crate concept and its implementations

Lecture Video

RO-Crate - Introduction

Registering Galaxy workflows in WorkflowHub

Lecture Video

Best practices for workflows in GitHub repositories

Get set up for the course!

Follow the steps below to get set up with everything you need to participate in the course!

Galaxy logo
Create a Galaxy Account

Create an account on one of the following Galaxy servers:

You will get an email with activation link. It may end up in your junk folder.

Note: If you already have a Galaxy account you can skip this step and just log in to your existing account.

cartoon of a person leaning against a laptop
Join Slack!

We will provide support via Slack. Here you can ask any questions you may have during the course, and socialize with your fellow participants and instructors. The following steps will get you set up with Slack:

  1. Join Slack via this Invite Link
  2. Join the event channel: #general
  3. Introduce yourself here!

Instructor Zone

Check out our checklists for

Request TIaaS

Training Infrastructure as a Service (TIaaS) is a service that allows you to request space for your course on a server, it helps ensure courses run smoothly by separating your trainee's jobs into a separate queue. Learn more about TIaaS in our tutorial.

The following links will open a (mostly) pre-filled out TIaaS form, if that server supports TIaaS. Otherwise you might see "page not found".

Once you receive a URL from the admins, please set it as a tiaas_link in your event metadata.

Add your event to the Galaxy Hub Event Horizon

To also list your event on the Galaxy Event Horizon, copy the text below, and add your event to the Galaxy Hub GitHub Repo. Create a folder for your event here, and add an index.md file with the following contents:

---
title: "Galaxy Training Academy 2025"
date: '2025-05-12'
days: 5
tease: The Galaxy Training Academy is a self-paced online training event for beginners and advanced learners who want to improve their Galaxy data analysis skills. 
Over the course of one week, we offer a diverse selection of learning track for you.

#continent: EU
location: "online"
external_url: "https://training.galaxyproject.org/training-material/events/2025-05-12-galaxy-academy-2025.html"
gtn: true
contact: "academy@galaxyproject.org"
subsites: [all]
---

Promote the Event

Tootable/Tweetable version:


Galaxy Training Academy 2025! 📢

The Galaxy Training Academy is a self-paced online training event for beginners and advanced learners who want to improve their Galaxy data analysis skills. 
Over the course of one week, we offer a diverse selection of learning track for you.


📅 May 12 – 16, 2025
➡️ https://training.galaxyproject.org/training-material/events/2025-05-12-galaxy-academy-2025.html

Slack-compatible version:


Galaxy Training Academy 2025! 📢

The Galaxy Training Academy is a self-paced online training event for beginners and advanced learners who want to improve their Galaxy data analysis skills. 
Over the course of one week, we offer a diverse selection of learning track for you.


:calendar: May 12 – 16, 2025
:arrow_right: https://training.galaxyproject.org/training-material/events/2025-05-12-galaxy-academy-2025.html

Version with schedule:


Galaxy Training Academy 2025! 📢

The Galaxy Training Academy is a self-paced online training event for beginners and advanced learners who want to improve their Galaxy data analysis skills. 
Over the course of one week, we offer a diverse selection of learning track for you.


**Agenda**:
- Monday: Introduction
- Friday: Grab bag

📅 May 12 – 16, 2025
➡️ https://training.galaxyproject.org/training-material/events/2025-05-12-galaxy-academy-2025.html