GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

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Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Natalie Kucher

Jonathan Kreplak

Robert Meller

Simon Gladman

Jasper Ouwerkerk

Helena Rasche

Frederick Tan

Bérénice Batut

Laura Leroi

Mateo Boudet

Anthony Bretaudeau

Erwan Corre

Yo Yehudi

Stéphanie Robin

Bazante Sanders

Simon Bray

Deepti Varshney

Candace Savonen

Daniela Butano

Paul Zierep

Miaomiao Zhou

Elizabeth Humphries

Saskia Hiltemann

Cristóbal Gallardo

Björn Grüning

Alexandre Cormier

Katherine Cox

Nathan Dunn

Anton Nekrutenko

Delphine Lariviere

Teresa Müller

Anna Syme

Ava Hoffman

Torsten Seemann

Funding

These individuals or organisations provided funding support for the development of this resource

ELIXIR Europe

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

NHGRI ANVIL

NHGRI GDS Community Network

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

Avans

ABRomics

IFB