Introduction to Galaxy Analyses — Editorial Board Home

This is a new, experimental "Editorial Board Home" for a given topic. It is intended to provide a single place for maintainers and editorial board members to find out key information about their topic and identify action items.

Editorial Board

Delphine Lariviere

Jennifer Hillman-Jackson

Action Items

Item	Status	Why you should do this
Summary	Done ✅	Provide a sufficiently detailed summary of the topic to let learners know what they're learning about in this topic.
Sufficient Editorial Board Members	Done ✅ (3 members)	Having multiple people sharing the burden of being responsible for a specific topic can reduce board member burn-out in the long term.
Enable Subtopics	Done ✅	Subtopics help organize the content and make it easier to navigate.
Annotate Funders	Done ✅ (13 funders)	By annotating the funders of your topic's materials, you make it easier to write your grant reports later
Learning Pathway CTA	Pending ❌	By providing a Learning Pathway CTA, we can help guide learners to the best resources for learning about this topic.
Review Feedback Received	Ongoing 🔁	Review all feedback received for the Introduction to Galaxy Analyses topic and create GitHub issues or PRs where needed.
Review open Pull Requests	Ongoing 🔁	View all open PRs in the Introduction to Galaxy Analyses topic and review, comment and merge!
Review open GitHub Issues	Ongoing 🔁	View all open issues related to the Introduction to Galaxy Analyses topic and comment, fix, or ask others for help!

Topic Materials

Material	Contributions v2 help	Pre-requisites help	Follow up trainings	Data on Zenodo	Notebook	Server Compatibility
Introduction to Galaxy	❌			✅
A short introduction to Galaxy	✅			✅
Galaxy Basics for everyone	✅			✅
Galaxy Basics for genomics	✅			✅
Introduction to Digital Humanities in Galaxy	✅			✅
Introduction to Galaxy as an RDM platform	✅			✅
Very Short Introductions: QC	❌			✅
Data Manipulation Olympics	✅			✅
From peaks to genes	✅			✅
How to reproduce published Galaxy analyses	✅			✅
IGV Introduction	❌			❌
Introduction to Genomics and Galaxy	✅			❌
NGS data logistics	✅			✅
Options for using Galaxy	❌			❌
Best Practices for Citing Galaxy	✅			✅
Introduction to the Dataverse Integration in Galaxy	✅			✅
Upload data to Galaxy	❌			✅

Topic Workflows

Material	Workflow	Updated	Version	Tests	Reports	Comments
A short introduction to Galaxy	Galaxy Intro Short	Oct 1, 2026	5	❌	❌	❌
Galaxy Basics for everyone	GTN Training: Galaxy 101 For Everyone	Oct 1, 2026	8	✅	❌	❌
Galaxy Basics for genomics	Find exons with the highest number of features	Oct 1, 2026	6	✅	✅	❌
Introduction to Digital Humanities in Galaxy	Introduction to DH in Galaxy	Oct 1, 2026	3	✅	✅	❌
Introduction to Galaxy as an RDM platform	Olympic Age Distribution	Oct 1, 2026	1	✅	✅	❌
Data Manipulation Olympics	GTN Tutorial: Data manipulation Olympics - all steps and exercises	Oct 1, 2026	1	❌	❌	❌
From peaks to genes	Galaxy Introduction Peaks2Genes - Part 1	Oct 1, 2026	1	✅	❌	❌
How to reproduce published Galaxy analyses	GTN Training: Galaxy 101 For Everyone	Oct 1, 2026	1	❌	❌	❌
Introduction to Genomics and Galaxy	Galaxy Intro Strands 2	Oct 1, 2026	4	❌	❌	❌
Introduction to Genomics and Galaxy	Galaxy Intro Strands	Oct 1, 2026	4	❌	❌	❌
NGS data logistics	NGS_tutorial	Oct 1, 2026	1	✅	✅	❌

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
toolshed.g2.bx.psu.edu/repos/devteam/fastq_quality_filter/cshl_fastq_quality_filter/1.0.1	1.0.1	1.0.1	1.0.2+galaxy2, 1.0.2, 1.0.0, 1.0.2+galaxy0	1.0.2+galaxy2, 1.0.2, 1.0.2+galaxy0	Missing	1.0.2+galaxy2	1.0.1	1.0.2+galaxy0
toolshed.g2.bx.psu.edu/repos/devteam/fastq_quality_filter/cshl_fastq_quality_filter/1.0.2+galaxy2	1.0.2+galaxy2	1.0.2+galaxy2	1.0.2+galaxy2	1.0.2+galaxy2	Missing	1.0.2+galaxy2	1.0.2+galaxy2	1.0.2+galaxy0
toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.72	0.72	0.72	0.72	0.72	0.72	0.74+galaxy1, 0.74+galaxy0	0.72	0.72+galaxy1, 0.73+galaxy0
toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.74+galaxy1	0.74+galaxy1	0.74+galaxy1	0.74+galaxy1	0.74+galaxy1	0.74+galaxy1	0.74+galaxy1	0.74+galaxy1	0.72+galaxy1, 0.73+galaxy0

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
Cut1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Grouping1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Remove beginning1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
csv_to_tabular	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sorted_uniq/1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0
toolshed.g2.bx.psu.edu/repos/iuc/datamash_ops/datamash_ops/1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.9+galaxy0, 1.8+galaxy0, 1.0.6	1.1.0	1.1.0
toolshed.g2.bx.psu.edu/repos/iuc/ggplot2_point/ggplot2_point/3.3.5+galaxy0	3.3.5+galaxy0	3.3.5+galaxy0	3.3.5+galaxy0	3.3.5+galaxy0	3.5.1+galaxy2, 3.4.0+galaxy1	3.5.1+galaxy2, 3.4.0+galaxy1	3.3.5+galaxy0	3.3.5+galaxy0
upload1	built-in	built-in	Missing	built-in	built-in	built-in	built-in	built-in

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
comp1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_head_tool/9.5+galaxy0	9.5+galaxy0	9.5+galaxy0	9.5+galaxy0	9.5+galaxy0	9.5+galaxy0	9.5+galaxy2, 9.5+galaxy3, 1.1.0, 9.3+galaxy1	9.5+galaxy0	1.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/1.1.1	1.1.1	1.1.1	1.1.1	1.1.1	1.1.1	1.1.1	1.1.1	1.1.1
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/9.5+galaxy0	9.5+galaxy0	9.5+galaxy0	9.5+galaxy0	9.5+galaxy0	9.5+galaxy0	9.5+galaxy2, 1.1.1, 9.5+galaxy3, 9.3+galaxy1	9.5+galaxy0	1.1.1, 1.1.0
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_intersectbed/2.31.1+galaxy0	2.31.1+galaxy0	2.31.1+galaxy0	2.31.1+galaxy0	2.31.1+galaxy0	2.31.1+galaxy0	2.31.1+galaxy0	2.31.1+galaxy0	2.29.2, 2.30.0, 2.19.0
toolshed.g2.bx.psu.edu/repos/iuc/datamash_ops/datamash_ops/1.8+galaxy0	1.8+galaxy0	1.8+galaxy0	1.8+galaxy0	1.8+galaxy0	1.8+galaxy0	1.8+galaxy0	1.1.0, 1.9+galaxy0, 1.1.0+galaxy2, 1.1.0+galaxy1, 1.0.6	1.1.0, 1.1.0+galaxy2, 1.1.0+galaxy1, 1.0.6
upload1	built-in	built-in	Missing	built-in	built-in	built-in	built-in	built-in

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
Remove beginning1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
toolshed.g2.bx.psu.edu/repos/bgruening/diff/diff/3.10+galaxy1	3.10+galaxy1	3.10+galaxy1	3.10+galaxy1	Missing	3.10+galaxy1	3.10+galaxy1	3.10+galaxy1	3.6+galaxy1, 3.6+galaxy2, 3.7+galaxy0
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_find_and_replace/9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	1.1.1, 1.1.0, 1.1.3
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_find_and_replace/9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	1.1.1, 1.1.0, 1.1.3
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_grep_tool/9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	1.1.1, 1.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_grep_tool/9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	1.1.1, 1.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_line/9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	1.1.0, 1.1.2, 1.1.1
toolshed.g2.bx.psu.edu/repos/bgruening/wordcloud/wordcloud/1.9.6+galaxy0	1.9.6+galaxy0	Missing	1.9.6+galaxy0	Missing	1.9.6+galaxy0	1.9.6+galaxy0	1.9.6+galaxy0	Missing

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
Summary_Statistics1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
export_remote	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
toolshed.g2.bx.psu.edu/repos/bgruening/imagemagick_image_montage/imagemagick_image_montage/7.1.2-2+galaxy1	7.1.2-2+galaxy1	7.1.2-2+galaxy1	7.1.2-2+galaxy1	Missing	7.1.2-2+galaxy1	7.1.2-2+galaxy1	7.1.2-2+galaxy1	Missing
toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/2.1	2.1	2.1	2.1	2.1	2.1	2.1	2.1	1.4, 1.3.0, 1.6, 2.0, 1.5, 1.3.1
toolshed.g2.bx.psu.edu/repos/imgteam/unzip/unzip/6.0+galaxy3	6.0+galaxy3	6.0+galaxy5	6.0+galaxy1, 0.2, 6.0+galaxy2, 6.0+galaxy5, 6.0+galaxy0	6.0+galaxy3	6.0+galaxy5	6.0+galaxy5, 6.0+galaxy0	6.0+galaxy3	0.2
toolshed.g2.bx.psu.edu/repos/iuc/column_remove_by_header/column_remove_by_header/1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0	1.0
toolshed.g2.bx.psu.edu/repos/iuc/ggplot2_histogram/ggplot2_histogram/3.5.1+galaxy1	3.5.1+galaxy1	3.5.1+galaxy1	3.5.1+galaxy1	3.5.1+galaxy1	3.5.1+galaxy1	3.5.1+galaxy1	3.5.1+galaxy1	3.3.5+galaxy0, 2.2.1+galaxy0

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
toolshed.g2.bx.psu.edu/repos/iuc/fastp/fastp/0.23.2+galaxy0	0.23.2+galaxy0	0.23.2+galaxy0	0.23.2+galaxy0	0.23.2+galaxy0	0.23.2+galaxy0	0.23.2+galaxy0	0.23.2+galaxy0	0.23.2+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.11+galaxy1	1.11+galaxy1	1.11+galaxy1	1.11+galaxy1	1.11+galaxy1	1.11+galaxy1	1.11+galaxy1	1.11+galaxy1	1.8+galaxy0, 1.9+galaxy1, 1.7.1, 1.8+galaxy2, 1.7, 1.11+galaxy0, 1.8+galaxy1, 1.9

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
Count1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Cut1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Filter1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Grouping1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Remove beginning1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Show beginning1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
cat1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
join1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
tabular_to_csv	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
toolshed.g2.bx.psu.edu/repos/bgruening/split_file_on_column/tp_split_on_column/0.4	0.4	0.4	0.6	0.4	0.4	0.4	0.4	0.4
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cat/0.1.1	0.1.1	0.1.1	0.1.1	0.1.1	0.1.1	0.1.1	0.1.1	0.1.1
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/1.1.1	1.1.1	1.1.1	1.1.1	1.1.1	1.1.1	1.1.1	1.1.1	1.1.1
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sorted_uniq/1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0
toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/1.6	1.6	1.6	1.6	1.6	1.6	2.1+galaxy0, 1.4, 2.1, 2.0	1.6	1.6
toolshed.g2.bx.psu.edu/repos/galaxyp/regex_find_replace/regexColumn1/1.0.1	1.0.1	1.0.1	1.0.1	1.0.1	1.0.1	1.0.3	1.0.1	1.0.3
toolshed.g2.bx.psu.edu/repos/iuc/datamash_ops/datamash_ops/1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.9+galaxy0, 1.8+galaxy0, 1.0.6	1.1.0	1.1.0
toolshed.g2.bx.psu.edu/repos/iuc/datamash_ops/datamash_ops/1.1.0+galaxy2	1.1.0+galaxy2	1.1.0+galaxy2	1.1.0+galaxy2	1.1.0+galaxy2	1.1.0+galaxy2	1.9+galaxy0, 1.8+galaxy0, 1.0.6	1.1.0+galaxy2	1.1.0+galaxy2
upload1	built-in	built-in	Missing	built-in	built-in	built-in	built-in	built-in
wc_gnu	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
{{version_cat}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_compute}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_count}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_cut_advanced}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_cut_columns}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_datamash}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_filter}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_join}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_paste}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_remove_beginning}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_remove_columns_by_header}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_replace_text_column}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_replace_text_line}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_select_first}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_sort}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_split}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_unique}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing
{{version_wc}}	Missing	Missing	Missing	Missing	Missing	Missing	Missing	Missing

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
CONVERTER_interval_to_bed_0	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Cut1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Grouping1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_column/1.1.3	1.1.3	1.1.3	1.1.3	1.1.3	1.1.3	1.1.3	1.1.3	1.1.3
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_column/9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	1.1.2, 1.1.3, 1.1.1, 1.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	1.1.1, 1.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_tail_tool/1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_tail_tool/9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	9.5+galaxy2	1.1.0
toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/2.1	2.1	2.1	2.1	2.1	2.1	2.1	2.1	1.4, 1.3.0, 1.6, 2.0, 1.5, 1.3.1
toolshed.g2.bx.psu.edu/repos/devteam/get_flanks/get_flanks1/1.0.0	1.0.0	1.0.0	1.0.0	1.0.0	Missing	1.0.0	1.0.0	1.0.0
toolshed.g2.bx.psu.edu/repos/devteam/intersect/gops_intersect_1/1.0.0	1.0.0	1.0.0	1.0.0	1.0.0	Missing	1.0.0	1.0.0	1.0.0
upload1	built-in	built-in	Missing	built-in	built-in	built-in	built-in	built-in

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
Cut1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Grouping1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
Remove beginning1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
csv_to_tabular	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sorted_uniq/1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0
toolshed.g2.bx.psu.edu/repos/iuc/datamash_ops/datamash_ops/1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0	1.9+galaxy0, 1.8+galaxy0, 1.0.6	1.1.0	1.1.0
toolshed.g2.bx.psu.edu/repos/iuc/ggplot2_point/ggplot2_point/2.2.1+galaxy1	2.2.1+galaxy1	2.2.1+galaxy1	3.4.0+galaxy0, 2.2.1+galaxy2, 3.3.5+galaxy1, 3.3.5+galaxy0, 3.3.5+galaxy2, 3.5.1+galaxy2, 3.4.0+galaxy1	3.4.0+galaxy0, 2.2.1+galaxy2, 3.3.5+galaxy1, 3.3.5+galaxy0, 3.3.5+galaxy2, 3.5.1+galaxy2, 3.4.0+galaxy1	3.5.1+galaxy2, 3.4.0+galaxy1	3.5.1+galaxy2, 3.4.0+galaxy1	2.2.1+galaxy1	2.2.1+galaxy2, 3.3.5+galaxy0
upload1	built-in	built-in	Missing	built-in	built-in	built-in	built-in	built-in

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
Filter1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
cat1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
gene2exon1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cat/0.1.0	0.1.0	0.1.0	0.1.0	0.1.0	0.1.0	9.5+galaxy2, 9.3+galaxy1, 9.5+galaxy3, 0.1.1	0.1.0	0.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	9.5+galaxy3	1.1.1, 1.1.0
toolshed.g2.bx.psu.edu/repos/devteam/intersect/gops_intersect_1/1.0.0	1.0.0	1.0.0	1.0.0	1.0.0	Missing	1.0.0	1.0.0	1.0.0

Data as of 2026-10-01 00:25:21 +0000

Tool	Galaxy Europe	Galaxy Main (US)	Galaxy Australia	Galaxy France	Galaxy Switzerland	Galaxy Canada	Galaxy Belgium	Galaxy Norway
Filter1	built-in	built-in	built-in	built-in	built-in	built-in	built-in	built-in
toolshed.g2.bx.psu.edu/repos/devteam/bwa/bwa/0.7.19	0.7.19	0.7.19	0.7.19	0.7.19	0.7.19	0.7.19	0.7.19	0.7.17.5, 0.7.17.3, 0.7.17.4
toolshed.g2.bx.psu.edu/repos/devteam/bwa/bwa_mem/0.7.19	0.7.19	0.7.19	0.7.19	0.7.19	0.7.19	0.7.19	0.7.19	0.7.17.1, 0.7.17.2
toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_MarkDuplicates/3.1.1.0	3.1.1.0	3.1.1.0	3.1.1.0	3.1.1.0	3.1.1.0	3.1.1.0	3.1.1.0	2.18.2.2
toolshed.g2.bx.psu.edu/repos/devteam/samtools_stats/samtools_stats/2.0.5	2.0.5	2.0.5	2.0.5	2.0.5	2.0.5	2.0.5	2.0.5	2.0.4, 2.0.2+galaxy2, 2.0.3
toolshed.g2.bx.psu.edu/repos/iuc/bwa_mem2/bwa_mem2/2.2.1+galaxy4	2.2.1+galaxy4	2.2.1+galaxy4	2.2.1+galaxy4	2.2.1+galaxy4	2.2.1+galaxy4	2.3+galaxy0, 2.2.1+galaxy1	2.2.1+galaxy0, 2.3+galaxy0, 2.2.1+galaxy1	Missing
toolshed.g2.bx.psu.edu/repos/iuc/fastp/fastp/0.24.0+galaxy4	0.24.0+galaxy4	0.24.0+galaxy4	0.24.0+galaxy4	0.24.0+galaxy4	0.24.0+galaxy4	0.23.2+galaxy0, 1.0.1+galaxy0, 0.23.4+galaxy0, 1.3.2+galaxy0	0.24.0+galaxy4	0.19.5+galaxy1, 0.23.2+galaxy0, 0.20.1+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/lofreq_call/lofreq_call/2.1.5+galaxy3	2.1.5+galaxy3	2.1.5+galaxy3	2.1.5+galaxy3	2.1.5+galaxy3	2.1.5+galaxy3	2.1.5+galaxy3	2.1.5+galaxy3	2.1.5+galaxy0, 2.1.5+galaxy2, 2.1.5+galaxy1, 2.1.4+galaxy2
toolshed.g2.bx.psu.edu/repos/iuc/lofreq_indelqual/lofreq_indelqual/2.1.5+galaxy1	2.1.5+galaxy1	2.1.5+galaxy1	2.1.5+galaxy1	2.1.5+galaxy1	2.1.5+galaxy1	2.1.5+galaxy1	2.1.5+galaxy1	2.1.5+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/lofreq_viterbi/lofreq_viterbi/2.1.5+galaxy0	2.1.5+galaxy0	2.1.5+galaxy0	2.1.5+galaxy0	2.1.5+galaxy0	2.1.5+galaxy0	2.1.5+galaxy0	2.1.5+galaxy0	2.1.5+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.27+galaxy3	1.27+galaxy3	1.27+galaxy3	1.27+galaxy3	1.27+galaxy3	1.27+galaxy3	1.27+galaxy3	1.27+galaxy3	1.8+galaxy0, 1.9+galaxy1, 1.7.1, 1.8+galaxy2, 1.7, 1.11+galaxy0, 1.8+galaxy1, 1.9
toolshed.g2.bx.psu.edu/repos/iuc/samtools_view/samtools_view/1.20+galaxy3	1.20+galaxy3	1.20+galaxy3	1.20+galaxy3	1.20+galaxy3	1.20+galaxy3	1.15.1+galaxy2, 1.21+galaxy0, 1.22+galaxy2, 1.15.1+galaxy0	1.20+galaxy3	1.9+galaxy3, 1.13+galaxy1, 1.9+galaxy2, 1.9+galaxy1, 1.15.1+galaxy0, 1.13+galaxy2, 1.13
toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff/5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	4.3+T.galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/snpeff/snpEff_build_gb/5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	5.2+galaxy0	4.3+T.galaxy2, 4.3+T.galaxy3, 4.3+T.galaxy4, 4.3+T.galaxy5
toolshed.g2.bx.psu.edu/repos/iuc/snpeff_sars_cov_2/snpeff_sars_cov_2/4.5covid19	4.5covid19	4.5covid19	4.5covid19	4.5covid19	4.5covid19	4.5covid19	4.5covid19	4.5covid19
toolshed.g2.bx.psu.edu/repos/iuc/snpsift/snpSift_extractFields/4.3+t.galaxy0	4.3+t.galaxy0	4.3+t.galaxy0	4.3+t.galaxy0	4.3+t.galaxy0	4.3+t.galaxy0	4.3+t.galaxy0	4.3+t.galaxy0	4.3+t.galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/3.1.1+galaxy1	3.1.1+galaxy1	3.1.1+galaxy1	3.1.1+galaxy1	3.1.1+galaxy1	3.1.1+galaxy1	3.1.1+galaxy1	3.1.1+galaxy1	2.11.0+galaxy1
toolshed.g2.bx.psu.edu/repos/nml/collapse_collections/collapse_dataset/5.1.0	5.1.0	5.1.0	5.1.0	5.1.0	5.1.0	5.1.0	5.1.0	5.1.0

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