Imaging
Image analysis using Galaxy
Requirements
Before diving into this topic, we recommend you to have a look at:
- Introduction to Galaxy Analyses
- tutorial Hands-on: FAIR Bioimage Metadata
- tutorial Hands-on: REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Frequently Asked Questions
Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.
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Community Resources
Community Home Maintainer HomeEditorial Board
This material is reviewed by our Editorial Board:
Leonid Kostrykin
Beatriz Serrano-Solano
Contributors
This material was contributed to by:
Jean-Karim Hériché
Riccardo Massei
Krzysztof Poterlowicz
Diana Chiang Jurado
Martin Čech
Katarzyna Kamieniecka
Armin Dadras
Thomas Wollmann
Helena Rasche
Julia Jakiela
Anne Fouilloux
Allison Creason
Saskia Hiltemann
Beatriz Serrano-Solano
Anup Kumar
Cristóbal Gallardo
Yi Sun
Even Moa Myklebust
Cameron Watson
Björn Grüning
Laura Cooper
Leonid Kostrykin
Funding
These individuals or organisations provided funding support for the development of this resource
DASH UK
This Fellowship was funded through the ELIXIR-UK DaSH project as part of the UKRI Innovation Scholars: Data Science Training in Health and Bioscience call (DaSH). (MR/V038966/1). The project aims to embed Research Data Management (RDM) know-how into UK universities and institutes by producing and delivering training in FAIR data stewardship using ELIXIR-UK knowledge and resources.
ELIXIR Europe
DFG
UFR
de.NBI
NFDI4Bioimage
References
- Thomas Wollmann et al: Workflows for microscopy image analysis and cellular phenotyping