Clea Siguret

Affiliations

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Editorial Roles

This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.

• Detection of AMR genes in bacterial genomes

Tutorials

• Microbiome / Building an amplicon sequence variant (ASV) table from 16S data using DADA2 📝
• Transcriptomics / Reference-based RNA-Seq data analysis 📝
• Ecology / Checking expected species and contamination in bacterial isolate 📝
• Sequence analysis / Quality and contamination control in bacterial isolate using Illumina MiSeq Data ✍️ 🧐

Video Recordings

• Sequence analysis / Quality and contamination control in bacterial isolate using Illumina MiSeq Data 💬 🗣

Events

• Galaxy Training Academy 2024 🧑‍🏫

GitHub Activity

github Issues Reported

7 Merged Pull Requests

See all of the github Pull Requests and github Commits by Clea Siguret.

• Ref-based RNA-seq: updated tutorial.md before training
  transcriptomics
• Add 'Quality and contamination control in bacterial isolate using Illumina MiSeq Data' tutorial
  template-and-tools
  sequence-analysis
• Ref-based RNA-seq: updated tools in tutorial.md before training
  transcriptomics
• Edit dada-16S tutorial.md
  microbiome
• Edit dada-16S tutorial.md
  microbiome

Reviewed 1 PRs

We love our community reviewing each other's work!

• Add 'Quality and contamination control in bacterial isolate using Illumina MiSeq Data' tutorial
  template-and-tools
  sequence-analysis

External Links

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