Jean-Karim Hériché

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Tutorials

Imaging / Object tracking using CellProfiler ✍️
Imaging / Nucleoli segmentation and feature extraction using CellProfiler ✍️

GitHub Activity

Issues Reported

News

Video of green coloured cells dividing on a dark background.

New Tutorial: Object tracking using CellProfiler

18 March 2021

Most biological processes are dynamic and observing them over time can provide valuable insights. Combining fluorescent markers with time-lapse imaging is a common approach to collect data on dynamic cellular processes such as cell division. However, automated time-lapse imaging can produce large amounts of data that can be challenging to process. One of these challenges is the tracking of individual objects as it is often impossible to manually follow a large number of objects over many time points.

new tutorial imaging

External Links

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