Create assemblies with Unicycler: pipeline for bacterial genomes

Metadata

Links

• bio.tools: Unicycler

EDAM Operations

• Genome assembly

EDAM Topics

• Sequence assembly

Observed Tool Versions

Within GTN tutorials

0.5.1+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• Galaxy@AuBi
• UseGalaxy.be
• UseGalaxy.cz

0.4.8.0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• GalaxyTrakr
• UseGalaxy.be
• UseGalaxy.no

0.4.7.0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.be

Relevant Tutorials

• Assembly / Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• Assembly / Hybrid genome assembly - Nanopore and Illumina
• Assembly / Unicycler Assembly
• Microbiome / Antibiotic resistance detection